Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC100131315 (uncharacterized LOC100131315)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100131315
Atlas_Id 66478
Location 15q13.3  [Link to chromosome band 15q13]
Location_base_pair Starts at 32718101 and ends at 32718865 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100131315  100131315  uncharacterized LOC100131315
Aliases
GeneCards (Weizmann)LOC100131315
Ensembl hg19 (Hinxton)ENSG00000259721 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000259721 [Gene_View]  chr15:32718101-32718865 [Contig_View]  LOC100131315 [Vega]
ICGC DataPortalENSG00000259721
TCGA cBioPortalLOC100131315
AceView (NCBI)LOC100131315
Genatlas (Paris)LOC100131315
WikiGenes100131315
SOURCE (Princeton)LOC100131315
Genetics Home Reference (NIH)LOC100131315
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100131315  -     chr15:32718101-32718865 -  15q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100131315  -     15q13.3   [Description]    (hg19-Feb_2009)
EnsemblLOC100131315 - 15q13.3 [CytoView hg19]  LOC100131315 - 15q13.3 [CytoView hg38]
Mapping of homologs : NCBILOC100131315 [Mapview hg19]  LOC100131315 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK093166 AW582922
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000015 NC_018926 NG_033791 NT_187660 NW_011332701 NW_012132920
Consensus coding sequences : CCDS (NCBI)LOC100131315
Cluster EST : UnigeneHs.610545 [ NCBI ]
CGAP (NCI)Hs.610545
Alternative Splicing GalleryENSG00000259721
Gene ExpressionLOC100131315 [ NCBI-GEO ]   LOC100131315 [ EBI - ARRAY_EXPRESS ]   LOC100131315 [ SEEK ]   LOC100131315 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100131315 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100131315
GTEX Portal (Tissue expression)LOC100131315
Human Protein AtlasENSG00000259721-LOC100131315 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100131315
DMDM Disease mutations100131315
Blocks (Seattle)LOC100131315
Human Protein Atlas [tissue]ENSG00000259721-LOC100131315 [tissue]
Protein Interaction databases
FunCoupENSG00000259721
BioGRIDLOC100131315
STRING (EMBL)LOC100131315
ZODIACLOC100131315
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100131315
BioCentury BCIQLOC100131315
ClinGenLOC100131315
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100131315
Clinical trialLOC100131315
Miscellaneous
canSAR (ICR)LOC100131315 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100131315
EVEXLOC100131315
GoPubMedLOC100131315
iHOPLOC100131315
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:00:38 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.