Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100131496 (uncharacterized LOC100131496)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100131496
Atlas_Id 66488
Location 20q13.12  [Link to chromosome band 20q13]
Location_base_pair Starts at 47318502 and ends at 47320754 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100131496  100131496  uncharacterized LOC100131496
Aliases
GeneCards (Weizmann)LOC100131496
Ensembl hg19 (Hinxton)ENSG00000267882 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000267882 [Gene_View]  chr20:47318502-47320754 [Contig_View]  LOC100131496 [Vega]
ICGC DataPortalENSG00000267882
TCGA cBioPortalLOC100131496
AceView (NCBI)LOC100131496
Genatlas (Paris)LOC100131496
WikiGenes100131496
SOURCE (Princeton)LOC100131496
Genetics Home Reference (NIH)LOC100131496
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100131496  -     chr20:47318502-47320754 +  20q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100131496  -     20q13.12   [Description]    (hg19-Feb_2009)
EnsemblLOC100131496 - 20q13.12 [CytoView hg19]  LOC100131496 - 20q13.12 [CytoView hg38]
Mapping of homologs : NCBILOC100131496 [Mapview hg19]  LOC100131496 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI198948 AK056171
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100131496
Cluster EST : UnigeneHs.662547 [ NCBI ]
CGAP (NCI)Hs.662547
Alternative Splicing GalleryENSG00000267882
Gene ExpressionLOC100131496 [ NCBI-GEO ]   LOC100131496 [ EBI - ARRAY_EXPRESS ]   LOC100131496 [ SEEK ]   LOC100131496 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100131496 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100131496
GTEX Portal (Tissue expression)LOC100131496
Human Protein AtlasENSG00000267882-LOC100131496 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100131496
DMDM Disease mutations100131496
Blocks (Seattle)LOC100131496
Human Protein Atlas [tissue]ENSG00000267882-LOC100131496 [tissue]
IPIIPI00043270   
Protein Interaction databases
FunCoupENSG00000267882
BioGRIDLOC100131496
STRING (EMBL)LOC100131496
ZODIACLOC100131496
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100131496
BioCentury BCIQLOC100131496
ClinGenLOC100131496
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100131496
Clinical trialLOC100131496
Miscellaneous
canSAR (ICR)LOC100131496 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100131496
EVEXLOC100131496
GoPubMedLOC100131496
iHOPLOC100131496
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:47:28 CET 2017

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