Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100131635 (hCG1645011-like)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100131635
Atlas_Id 66498
Location 3q27.3  [Link to chromosome band 3q27]
Location_base_pair Starts at 187702366 and ends at 187732415 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100131635  100131635  hCG1645011-like
Aliases
GeneCards (Weizmann)LOC100131635
Ensembl hg19 (Hinxton)ENSG00000228804 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228804 [Gene_View]  chr3:187702366-187732415 [Contig_View]  LOC100131635 [Vega]
ICGC DataPortalENSG00000228804
TCGA cBioPortalLOC100131635
AceView (NCBI)LOC100131635
Genatlas (Paris)LOC100131635
WikiGenes100131635
SOURCE (Princeton)LOC100131635
Genetics Home Reference (NIH)LOC100131635
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100131635  -     chr3:187702366-187732415 +  3q27.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100131635  -     3q27.3   [Description]    (hg19-Feb_2009)
EnsemblLOC100131635 - 3q27.3 [CytoView hg19]  LOC100131635 - 3q27.3 [CytoView hg38]
Mapping of homologs : NCBILOC100131635 [Mapview hg19]  LOC100131635 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW235368
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100131635
Cluster EST : UnigeneHs.434448 [ NCBI ]
CGAP (NCI)Hs.434448
Alternative Splicing GalleryENSG00000228804
Gene ExpressionLOC100131635 [ NCBI-GEO ]   LOC100131635 [ EBI - ARRAY_EXPRESS ]   LOC100131635 [ SEEK ]   LOC100131635 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100131635 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100131635
GTEX Portal (Tissue expression)LOC100131635
Human Protein AtlasENSG00000228804-LOC100131635 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100131635
DMDM Disease mutations100131635
Blocks (Seattle)LOC100131635
Human Protein Atlas [tissue]ENSG00000228804-LOC100131635 [tissue]
Protein Interaction databases
FunCoupENSG00000228804
BioGRIDLOC100131635
STRING (EMBL)LOC100131635
ZODIACLOC100131635
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100131635
BioCentury BCIQLOC100131635
ClinGenLOC100131635
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100131635
Clinical trialLOC100131635
Miscellaneous
canSAR (ICR)LOC100131635 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100131635
EVEXLOC100131635
GoPubMedLOC100131635
iHOPLOC100131635
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:00:42 CET 2017

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