Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100132352 (FSHD region gene 1 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100132352
Atlas_Id 66550
Location 9q21.11  [Link to chromosome band 9q21]
Location_base_pair Starts at 68726541 and ends at 68748376 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100132352  100132352  FSHD region gene 1 pseudogene
Aliases
GeneCards (Weizmann)LOC100132352
Ensembl hg19 (Hinxton) [Gene_View]  chr9:68726541-68748376 [Contig_View]  LOC100132352 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr9:68726541-68748376 [Contig_View]  LOC100132352 [Vega]
TCGA cBioPortalLOC100132352
AceView (NCBI)LOC100132352
Genatlas (Paris)LOC100132352
WikiGenes100132352
SOURCE (Princeton)LOC100132352
Genetics Home Reference (NIH)LOC100132352
Genomic and cartography
GoldenPath hg19 (UCSC)LOC100132352  -     chr9:68726541-68748376 +  9q21.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC100132352  -     9q21.11   [Description]    (hg38-Dec_2013)
EnsemblLOC100132352 - 9q21.11 [CytoView hg19]  LOC100132352 - 9q21.11 [CytoView hg38]
Mapping of homologs : NCBILOC100132352 [Mapview hg19]  LOC100132352 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI377106 AK311167 CN268684 DB249823 DR007945
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000009 NC_018920 NT_008413 NW_004929361
Consensus coding sequences : CCDS (NCBI)LOC100132352
Cluster EST : UnigeneHs.231861 [ NCBI ]
CGAP (NCI)Hs.231861
Gene ExpressionLOC100132352 [ NCBI-GEO ]   LOC100132352 [ EBI - ARRAY_EXPRESS ]   LOC100132352 [ SEEK ]   LOC100132352 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100132352 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100132352
GTEX Portal (Tissue expression)LOC100132352
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100132352
DMDM Disease mutations100132352
Blocks (Seattle)LOC100132352
Protein Interaction databases
BioGRIDLOC100132352
STRING (EMBL)LOC100132352
ZODIACLOC100132352
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100132352
BioCentury BCIQLOC100132352
ClinGenLOC100132352
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100132352
Clinical trialLOC100132352
Miscellaneous
canSAR (ICR)LOC100132352 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100132352
EVEXLOC100132352
GoPubMedLOC100132352
iHOPLOC100132352
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:16:06 CET 2017

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