Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100132731 (uncharacterized LOC100132731)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100132731
Atlas_Id 66561
Location 3q21.3  [Link to chromosome band 3q21]
Location_base_pair Starts at 128909866 and ends at 128994076 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100132731  100132731  uncharacterized LOC100132731
Aliases
GeneCards (Weizmann)LOC100132731
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:128909866-128994076 [Contig_View]  LOC100132731 [Vega]
TCGA cBioPortalLOC100132731
AceView (NCBI)LOC100132731
Genatlas (Paris)LOC100132731
WikiGenes100132731
SOURCE (Princeton)LOC100132731
Genetics Home Reference (NIH)LOC100132731
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100132731  -     chr3:128909866-128994076 -  3q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100132731  -     3q21.3   [Description]    (hg19-Feb_2009)
EnsemblLOC100132731 - 3q21.3 [CytoView hg19]  LOC100132731 - 3q21.3 [CytoView hg38]
Mapping of homologs : NCBILOC100132731 [Mapview hg19]  LOC100132731 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056377 AK125726
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100132731
Cluster EST : UnigeneHs.734225 [ NCBI ]
CGAP (NCI)Hs.734225
Gene ExpressionLOC100132731 [ NCBI-GEO ]   LOC100132731 [ EBI - ARRAY_EXPRESS ]   LOC100132731 [ SEEK ]   LOC100132731 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100132731 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100132731
GTEX Portal (Tissue expression)LOC100132731
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZUG5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZUG5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZUG5
Splice isoforms : SwissVarQ6ZUG5
PhosPhoSitePlusQ6ZUG5
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100132731
DMDM Disease mutations100132731
Blocks (Seattle)LOC100132731
SuperfamilyQ6ZUG5
Peptide AtlasQ6ZUG5
IPIIPI00419041   IPI00965125   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZUG5
IntAct (EBI)Q6ZUG5
BioGRIDLOC100132731
STRING (EMBL)LOC100132731
ZODIACLOC100132731
Ontologies - Pathways
QuickGOQ6ZUG5
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkLOC100132731
Atlas of Cancer Signalling NetworkLOC100132731
Wikipedia pathwaysLOC100132731
Orthology - Evolution
OrthoDB100132731
Phylogenetic Trees/Animal Genes : TreeFam-
HOVERGENQ6ZUG5
HOGENOMQ6ZUG5
Homologs : HomoloGeneLOC100132731
Homology/Alignments : Family Browser (UCSC)LOC100132731
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLOC100132731 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LOC100132731
dbVarLOC100132731
ClinVarLOC100132731
1000_GenomesLOC100132731 
Exome Variant ServerLOC100132731
ExAC (Exome Aggregation Consortium)LOC100132731 (select the gene name)
Genetic variants : HAPMAP100132731
Genomic Variants (DGV)LOC100132731 [DGVbeta]
DECIPHERLOC100132731 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLOC100132731 
Mutations
ICGC Data Portal- 
TCGA Data Portal- 
Broad Tumor Portal-
OASIS Portal- [ Somatic mutations - Copy number]
Mutations and Diseases : HGMD-
BioMutasearch LOC100132731
DgiDB (Drug Gene Interaction Database)LOC100132731
DoCM (Curated mutations)LOC100132731 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LOC100132731 (select a term)
intoGenLOC100132731
Cancer3DLOC100132731(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenLOC100132731
Genetic Testing Registry LOC100132731
NextProtQ6ZUG5 [Medical]
TSGene100132731
GENETestsLOC100132731
Target ValidationLOC100132731
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100132731
BioCentury BCIQLOC100132731
ClinGenLOC100132731
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100132731
Clinical trialLOC100132731
Miscellaneous
canSAR (ICR)LOC100132731 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100132731
EVEXLOC100132731
GoPubMedLOC100132731
iHOPLOC100132731
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 16:01:33 CEST 2017

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