Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100132813 (uncharacterized LOC100132813)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100132813
Atlas_Id 66568
Location 8q23.2  [Link to chromosome band 8q23]
Location_base_pair Starts at 109644115 and ends at 109648084 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100132813  100132813  uncharacterized LOC100132813
Aliases
GeneCards (Weizmann)LOC100132813
Ensembl hg19 (Hinxton)ENSG00000248050 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248050 [Gene_View]  chr8:109644115-109648084 [Contig_View]  LOC100132813 [Vega]
ICGC DataPortalENSG00000248050
TCGA cBioPortalLOC100132813
AceView (NCBI)LOC100132813
Genatlas (Paris)LOC100132813
WikiGenes100132813
SOURCE (Princeton)LOC100132813
Genetics Home Reference (NIH)LOC100132813
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100132813  -     chr8:109644115-109648084 +  8q23.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100132813  -     8q23.2   [Description]    (hg19-Feb_2009)
EnsemblLOC100132813 - 8q23.2 [CytoView hg19]  LOC100132813 - 8q23.2 [CytoView hg38]
Mapping of homologs : NCBILOC100132813 [Mapview hg19]  LOC100132813 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK093952
RefSeq transcript (Entrez)NM_001317989
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100132813
Cluster EST : UnigeneHs.390738 [ NCBI ]
CGAP (NCI)Hs.390738
Alternative Splicing GalleryENSG00000248050
Gene ExpressionLOC100132813 [ NCBI-GEO ]   LOC100132813 [ EBI - ARRAY_EXPRESS ]   LOC100132813 [ SEEK ]   LOC100132813 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100132813 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100132813
GTEX Portal (Tissue expression)LOC100132813
Human Protein AtlasENSG00000248050-LOC100132813 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100132813
DMDM Disease mutations100132813
Blocks (Seattle)LOC100132813
Human Protein Atlas [tissue]ENSG00000248050-LOC100132813 [tissue]
IPIIPI00981970   
Protein Interaction databases
FunCoupENSG00000248050
BioGRIDLOC100132813
STRING (EMBL)LOC100132813
ZODIACLOC100132813
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100132813
BioCentury BCIQLOC100132813
ClinGenLOC100132813
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100132813
Clinical trialLOC100132813
Miscellaneous
canSAR (ICR)LOC100132813 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100132813
EVEXLOC100132813
GoPubMedLOC100132813
iHOPLOC100132813
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:47:45 CET 2017

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