Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100268168 (uncharacterized LOC100268168)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100268168
Atlas_Id 66612
Location 5q35.1  [Link to chromosome band 5q35]
Location_base_pair Starts at 172954783 and ends at 172959368 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100268168  100268168  uncharacterized LOC100268168
Aliases
GeneCards (Weizmann)LOC100268168
Ensembl hg19 (Hinxton)ENSG00000204758 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204758 [Gene_View]  chr5:172954783-172959368 [Contig_View]  LOC100268168 [Vega]
ICGC DataPortalENSG00000204758
TCGA cBioPortalLOC100268168
AceView (NCBI)LOC100268168
Genatlas (Paris)LOC100268168
WikiGenes100268168
SOURCE (Princeton)LOC100268168
Genetics Home Reference (NIH)LOC100268168
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100268168  -     chr5:172954783-172959368 -  5q35.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100268168  -     5q35.1   [Description]    (hg19-Feb_2009)
EnsemblLOC100268168 - 5q35.1 [CytoView hg19]  LOC100268168 - 5q35.1 [CytoView hg38]
Mapping of homologs : NCBILOC100268168 [Mapview hg19]  LOC100268168 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI457435 AK125729 BU078327 BX100317 CA777768
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100268168
Cluster EST : UnigeneHs.519766 [ NCBI ]
CGAP (NCI)Hs.519766
Alternative Splicing GalleryENSG00000204758
Gene ExpressionLOC100268168 [ NCBI-GEO ]   LOC100268168 [ EBI - ARRAY_EXPRESS ]   LOC100268168 [ SEEK ]   LOC100268168 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100268168 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100268168
GTEX Portal (Tissue expression)LOC100268168
Human Protein AtlasENSG00000204758-LOC100268168 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100268168
DMDM Disease mutations100268168
Blocks (Seattle)LOC100268168
Human Protein Atlas [tissue]ENSG00000204758-LOC100268168 [tissue]
IPIIPI00445611   
Protein Interaction databases
FunCoupENSG00000204758
BioGRIDLOC100268168
STRING (EMBL)LOC100268168
ZODIACLOC100268168
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100268168
BioCentury BCIQLOC100268168
ClinGenLOC100268168
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100268168
Clinical trialLOC100268168
Miscellaneous
canSAR (ICR)LOC100268168 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100268168
EVEXLOC100268168
GoPubMedLOC100268168
iHOPLOC100268168
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:47:54 CET 2017

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