Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100287042 (uncharacterized LOC100287042)

Identity

Other alias-4/ONT>
HGNC (Hugo) -
LocusID (NCBI) 100287042
Atlas_Id 66625
Location 17q25.1  [Link to chromosome band 17q25]
Location_base_pair Starts at 75271299 and ends at 75273895 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100287042  100287042  uncharacterized LOC100287042
Aliases
GeneCards (Weizmann)LOC100287042
Ensembl hg19 (Hinxton)ENSG00000263843 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000263843 [Gene_View]  chr17:75271299-75273895 [Contig_View]  LOC100287042 [Vega]
ICGC DataPortalENSG00000263843
TCGA cBioPortalLOC100287042
AceView (NCBI)LOC100287042
Genatlas (Paris)LOC100287042
WikiGenes100287042
SOURCE (Princeton)LOC100287042
Genetics Home Reference (NIH)LOC100287042
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100287042  -     chr17:75271299-75273895 +  17q25.1   [Description]    (hg38-Eec_017)
GoldenPath hg19 (UCSC)LOC100287042  -     17q25.1   [Description]    (hg19-Feb_2009)
EnsemblLOC100287042 - 17q25.1 [CytoView hg19]  LOC100287042 - 17q25.1 [CytoView hg38]
Mapping of homologs : NCBILOC100287042 [Mapview hg19]  LOC100287042 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK296245 BC021162
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100287042
Cluster EST : UnigeneHs.735738 [ NCBI ]
CGAP (NCI)Hs.735738
Alternative Splicing GalleryENSG00000263843
Gene ExpressionLOC100287042 [ NCBI-GEO ]   LOC100287042 [ EBI - ARRAY_EXPRESS ]   LOC100287042 [ SEEK ]   LOC100287042 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100287042 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100287042
GTEX Portal (Tissue expression)LOC100287042
Human Protein AtlasENSG00000263843-LOC100287042 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100287042
DMDM Disease mutations100287042
Blocks (Seattle)LOC100287042
Human Protein Atlas [tissue]ENSG00000263843-LOC100287042 [tissue]
Protein Interaction databases
FunCoupENSG00000263843
BioGRIDLOC100287042
STRING (EMBL)LOC100287042
ZODIACLOC100287042
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100287042
BioCentury BCIQLOC100287042
ClinGenLOC100287042
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100287042
Clinical trialLOC100287042
Miscellaneous
canSAR (ICR)LOC100287042 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100287042
EVEXLOC100287042
GoPubMedLOC100287042
iHOPLOC100287042
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:01:10 CET 2017

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