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LOC100287072 (ribosomal protein S6 kinase B1 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100287072
Atlas_Id 66626
Location 17p11.2  [Link to chromosome band 17p11]
Location_base_pair Starts at 20712446 and ends at 20737865 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas. Mitdlean, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100287072  100287072  ribosomal protein S6 kinase B1 pseudogene
Aliases
GeneCards (Weizmann)LOC100287072
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:20712446-20737865 [Contig_View]  LOC100287072 [Vega]
TCGA cBioPortalLOC100287072
AceView (NCBI)LOC100287072
Genatlas (Paris)LOC100287072
WikiGenes100287072
SOURCE (Princeton)LOC100287072
Genetics Home Reference (NIH)LOC100287072
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100287072  -     chr17:20712446-20737865 +  17p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100287072  -     17p11.2   [Description]    (hg19-Feb_2009)
EnsemblLOC100287072 - 17p11.2 [CytoView hg19]  LOC100287072 - 17p11.2 [CytoView hg38]
Mapping of homologs : NCBILOC100287072 [Mapview hg19]  LOC100287072 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA322644 DB442616 EG328240
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100287072
Cluster EST : UnigeneHs.676308 [ NCBI ]
CGAP (NCI)Hs.676308
Gene ExpressionLOC100287072 [ NCBI-GEO ]   LOC100287072 [ EBI - ARRAY_EXPRESS ]   LOC100287072 [ SEEK ]   LOC100287072 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100287072 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100287072
GTEX Portal (Tissue expression)LOC100287072
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100287072
DMDM Disease mutations100287072
Blocks (Seattle)LOC100287072
Protein Interaction databases
BioGRIDLOC100287072
STRING (EMBL)LOC100287072
ZODIACLOC100287072
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100287072
BioCentury BCIQLOC100287072
ClinGenLOC100287072
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100287072
Clinical trialLOC100287072
Miscellaneous
canSAR (ICR)LOC100287072 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100287072
EVEXLOC100287072
GoPubMedLOC100287072
iHOPLOC100287072
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:01:11 CET 2017

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