Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100287166 (uncharacterized LOC100287166)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100287166
Atlas_Id 66629
Location 20p11.23  [Link to chromosome band 20p11]
Location_base_pair Starts at 19756390 and ends at 19758037 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100287166  100287166  uncharacterized LOC100287166
Aliases
GeneCards (Weizmann)LOC100287166
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr20:19756390-19758037 [Contig_View]  LOC100287166 [Vega]
TCGA cBioPortalLOC100287166
AceView (NCBI)LOC100287166
Genatlas (Paris)LOC100287166
WikiGenes100287166
SOURCE (Princeton)LOC100287166
Genetics Home Reference (NIH)LOC100287166
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100287166  -     chr20:19756390-19758037 -  20p11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100287166  -     20p11.23   [Description]    (hg19-Feb_2009)
EnsemblLOC100287166 - 20p11.23 [CytoView hg19]  LOC100287166 - 20p11.23 [CytoView hg38]
Mapping of homologs : NCBILOC100287166 [Mapview hg19]  LOC100287166 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC004382
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100287166
Cluster EST : UnigeneHs.650137 [ NCBI ]
CGAP (NCI)Hs.650137
Gene ExpressionLOC100287166 [ NCBI-GEO ]   LOC100287166 [ EBI - ARRAY_EXPRESS ]   LOC100287166 [ SEEK ]   LOC100287166 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100287166 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100287166
GTEX Portal (Tissue expression)LOC100287166
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100287166
DMDM Disease mutations100287166
Blocks (Seattle)LOC100287166
IPIIPI00158091   
Protein Interaction databases
BioGRIDLOC100287166
STRING (EMBL)LOC100287166
ZODIACLOC100287166
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100287166
BioCentury BCIQLOC100287166
ClinGenLOC100287166
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100287166
Clinical trialLOC100287166
Miscellaneous
canSAR (ICR)LOC100287166 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100287166
EVEXLOC100287166
GoPubMedLOC100287166
iHOPLOC100287166
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:47:57 CET 2017

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