Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC100287329 (uncharacterized LOC100287329)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100287329
Atlas_Id 66635
Location 6_GL000256v2_alt  [Link to chromosome band 6]
Location_base_pair Starts at 2858852 and ends at 2871983 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100287329  100287329  uncharacterized LOC100287329
Aliases
GeneCards (Weizmann)LOC100287329
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr6_GL000256v2_alt:2858852-2871983 [Contig_View]  LOC100287329 [Vega]
TCGA cBioPortalLOC100287329
AceView (NCBI)LOC100287329
Genatlas (Paris)LOC100287329
WikiGenes100287329
SOURCE (Princeton)LOC100287329
Genetics Home Reference (NIH)LOC100287329
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100287329  -     chr6_GL000256v2_alt:2858852-2871983 -  6_GL000256v2_alt   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100287329  -     6_GL000256v2_alt   [Description]    (hg19-Feb_2009)
EnsemblLOC100287329 - 6_GL000256v2_alt [CytoView hg19]  LOC100287329 - 6_GL000256v2_alt [CytoView hg38]
Mapping of homologs : NCBILOC100287329 [Mapview hg19]  LOC100287329 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK301217
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000006 NC_018917 NT_113891 NT_167245 NT_167246 NT_167247 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)LOC100287329
Cluster EST : UnigeneHs.694620 [ NCBI ]
CGAP (NCI)Hs.694620
Gene ExpressionLOC100287329 [ NCBI-GEO ]   LOC100287329 [ EBI - ARRAY_EXPRESS ]   LOC100287329 [ SEEK ]   LOC100287329 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100287329 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100287329
GTEX Portal (Tissue expression)LOC100287329
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100287329
DMDM Disease mutations100287329
Blocks (Seattle)LOC100287329
Protein Interaction databases
BioGRIDLOC100287329
STRING (EMBL)LOC100287329
ZODIACLOC100287329
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100287329
BioCentury BCIQLOC100287329
ClinGenLOC100287329
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100287329
Clinical trialLOC100287329
Miscellaneous
canSAR (ICR)LOC100287329 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100287329
EVEXLOC100287329
GoPubMedLOC100287329
iHOPLOC100287329
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:47:59 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.