Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100287497 (septin 7 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100287497
Atlas_Id 66638
Location 1q42.11  [Link to chromosome band 1q42]
Location_base_pair Starts at 223992730 and ends at 224010607 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100287497  100287497  septin 7 pseudogene
Aliases
GeneCards (Weizmann)LOC100287497
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:223992730-224010607 [Contig_View]  LOC100287497 [Vega]
TCGA cBioPortalLOC100287497
AceView (NCBI)LOC100287497
Genatlas (Paris)LOC100287497
WikiGenes100287497
SOURCE (Princeton)LOC100287497
Genetics Home Reference (NIH)LOC100287497
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100287497  -     chr1:223992730-224010607 +  1q42.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100287497  -     1q42.11   [Description]    (hg19-Feb_2009)
EnsemblLOC100287497 - 1q42.11 [CytoView hg19]  LOC100287497 - 1q42.11 [CytoView hg38]
Mapping of homologs : NCBILOC100287497 [Mapview hg19]  LOC100287497 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK026836 AK094548 AK124970 BX281887 DA132394
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100287497
Cluster EST : UnigeneHs.648548 [ NCBI ]
CGAP (NCI)Hs.648548
Gene ExpressionLOC100287497 [ NCBI-GEO ]   LOC100287497 [ EBI - ARRAY_EXPRESS ]   LOC100287497 [ SEEK ]   LOC100287497 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100287497 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100287497
GTEX Portal (Tissue expression)LOC100287497
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100287497
DMDM Disease mutations100287497
Blocks (Seattle)LOC100287497
IPIIPI00302339   
Protein Interaction databases
BioGRIDLOC100287497
STRING (EMBL)LOC100287497
ZODIACLOC100287497
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100287497
BioCentury BCIQLOC100287497
ClinGenLOC100287497
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100287497
Clinical trialLOC100287497
Miscellaneous
canSAR (ICR)LOC100287497 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100287497
EVEXLOC100287497
GoPubMedLOC100287497
iHOPLOC100287497
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 16:01:51 CEST 2017

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