Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100287590 (uncharacterized LOC100287590)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100287590
Atlas_Id 66641
Location 17q21.2  [Link to chromosome band 17q21]
Location_base_pair Starts at 40648522 and ends at 40650573 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100287590  100287590  uncharacterized LOC100287590
Aliases
GeneCards (Weizmann)LOC100287590
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:40648522-40650573 [Contig_View]  LOC100287590 [Vega]
TCGA cBioPortalLOC100287590
AceView (NCBI)LOC100287590
Genatlas (Paris)LOC100287590
WikiGenes100287590
SOURCE (Princeton)LOC100287590
Genetics Home Reference (NIH)LOC100287590
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100287590  -     chr17:40648522-40650573 +  17q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100287590  -     17q21.2   [Description]    (hg19-Feb_2009)
EnsemblLOC100287590 - 17q21.2 [CytoView hg19]  LOC100287590 - 17q21.2 [CytoView hg38]
Mapping of homologs : NCBILOC100287590 [Mapview hg19]  LOC100287590 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC005066
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100287590
Cluster EST : UnigeneHs.463010 [ NCBI ]
CGAP (NCI)Hs.463010
Gene ExpressionLOC100287590 [ NCBI-GEO ]   LOC100287590 [ EBI - ARRAY_EXPRESS ]   LOC100287590 [ SEEK ]   LOC100287590 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100287590 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100287590
GTEX Portal (Tissue expression)LOC100287590
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100287590
DMDM Disease mutations100287590
Blocks (Seattle)LOC100287590
IPIIPI00936246   
Protein Interaction databases
BioGRIDLOC100287590
STRING (EMBL)LOC100287590
ZODIACLOC100287590
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100287590
BioCentury BCIQLOC100287590
ClinGenLOC100287590
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100287590
Clinical trialLOC100287590
Miscellaneous
canSAR (ICR)LOC100287590 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100287590
EVEXLOC100287590
GoPubMedLOC100287590
iHOPLOC100287590
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:48:00 CET 2017

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