Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100287792 (uncharacterized LOC100287792)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100287792
Atlas_Id 66647
Location 20q11.23  [Link to chromosome band 20q11]
Location_base_pair Starts at 37676910 and ends at 37683234 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100287792  100287792  uncharacterized LOC100287792
Aliases
GeneCards (Weizmann)LOC100287792
Ensembl hg19 (Hinxton)ENSG00000204117 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204117 [Gene_View]  chr20:37676910-37683234 [Contig_View]  LOC100287792 [Vega]
ICGC DataPortalENSG00000204117
TCGA cBioPortalLOC100287792
AceView (NCBI)LOC100287792
Genatlas (Paris)LOC100287792
WikiGenes100287792
SOURCE (Princeton)LOC100287792
Genetics Home Reference (NIH)LOC100287792
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100287792  -     chr20:37676910-37683234 +  20q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100287792  -     20q11.23   [Description]    (hg19-Feb_2009)
EnsemblLOC100287792 - 20q11.23 [CytoView hg19]  LOC100287792 - 20q11.23 [CytoView hg38]
Mapping of homologs : NCBILOC100287792 [Mapview hg19]  LOC100287792 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK124127
RefSeq transcript (Entrez)NM_001001690
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100287792
Cluster EST : UnigeneHs.517026 [ NCBI ]
CGAP (NCI)Hs.517026
Alternative Splicing GalleryENSG00000204117
Gene ExpressionLOC100287792 [ NCBI-GEO ]   LOC100287792 [ EBI - ARRAY_EXPRESS ]   LOC100287792 [ SEEK ]   LOC100287792 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100287792 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100287792
GTEX Portal (Tissue expression)LOC100287792
Human Protein AtlasENSG00000204117-LOC100287792 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100287792
DMDM Disease mutations100287792
Blocks (Seattle)LOC100287792
Human Protein Atlas [tissue]ENSG00000204117-LOC100287792 [tissue]
IPIIPI00419150   
Protein Interaction databases
FunCoupENSG00000204117
BioGRIDLOC100287792
STRING (EMBL)LOC100287792
ZODIACLOC100287792
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100287792
BioCentury BCIQLOC100287792
ClinGenLOC100287792
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100287792
Clinical trialLOC100287792
Miscellaneous
canSAR (ICR)LOC100287792 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100287792
EVEXLOC100287792
GoPubMedLOC100287792
iHOPLOC100287792
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:48:02 CET 2017

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