Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100287846 (patched 1 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100287846
Atlas_Id 66651
Location 8q11.1  [Link to chromosome band 8q11]
Location_base_pair Starts at 47189307 and ends at 47192816 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100287846  100287846  patched 1 pseudogene
Aliases
GeneCards (Weizmann)LOC100287846
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr8:47189307-47192816 [Contig_View]  LOC100287846 [Vega]
TCGA cBioPortalLOC100287846
AceView (NCBI)LOC100287846
Genatlas (Paris)LOC100287846
WikiGenes100287846
SOURCE (Princeton)LOC100287846
Genetics Home Reference (NIH)LOC100287846
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100287846  -     chr8:47189307-47192816 +  8q11.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100287846  -     8q11.1   [Description]    (hg19-Feb_2009)
EnsemblLOC100287846 - 8q11.1 [CytoView hg19]  LOC100287846 - 8q11.1 [CytoView hg38]
Mapping of homologs : NCBILOC100287846 [Mapview hg19]  LOC100287846 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB469678 R40449
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100287846
Cluster EST : UnigeneHs.21550 [ NCBI ]
CGAP (NCI)Hs.21550
Gene ExpressionLOC100287846 [ NCBI-GEO ]   LOC100287846 [ EBI - ARRAY_EXPRESS ]   LOC100287846 [ SEEK ]   LOC100287846 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100287846 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100287846
GTEX Portal (Tissue expression)LOC100287846
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100287846
DMDM Disease mutations100287846
Blocks (Seattle)LOC100287846
Protein Interaction databases
BioGRIDLOC100287846
STRING (EMBL)LOC100287846
ZODIACLOC100287846
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100287846
BioCentury BCIQLOC100287846
ClinGenLOC100287846
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100287846
Clinical trialLOC100287846
Miscellaneous
canSAR (ICR)LOC100287846 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100287846
EVEXLOC100287846
GoPubMedLOC100287846
iHOPLOC100287846
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 16:01:54 CEST 2017

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