Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100287877 (uncharacterized LOC100287877)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100287877
Atlas_Id 66653
Location 1p36.31  [Link to chromosome band 1p36]
Location_base_pair Starts at 5708173 and ends at 5712165 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100287877  100287877  uncharacterized LOC100287877
Aliases
GeneCards (Weizmann)LOC100287877
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:5708173-5712165 [Contig_View]  LOC100287877 [Vega]
TCGA cBioPortalLOC100287877
AceView (NCBI)LOC100287877
Genatlas (Paris)LOC100287877
WikiGenes100287877
SOURCE (Princeton)LOC100287877
Genetics Home Reference (NIH)LOC100287877
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100287877  -     chr1:5708173-5712165 -  1p36.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100287877  -     1p36.31   [Description]    (hg19-Feb_2009)
EnsemblLOC100287877 - 1p36.31 [CytoView hg19]  LOC100287877 - 1p36.31 [CytoView hg38]
Mapping of homologs : NCBILOC100287877 [Mapview hg19]  LOC100287877 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC039532
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100287877
Cluster EST : UnigeneHs.407532 [ NCBI ]
CGAP (NCI)Hs.407532
Gene ExpressionLOC100287877 [ NCBI-GEO ]   LOC100287877 [ EBI - ARRAY_EXPRESS ]   LOC100287877 [ SEEK ]   LOC100287877 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100287877 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100287877
GTEX Portal (Tissue expression)LOC100287877
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100287877
DMDM Disease mutations100287877
Blocks (Seattle)LOC100287877
Protein Interaction databases
BioGRIDLOC100287877
STRING (EMBL)LOC100287877
ZODIACLOC100287877
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100287877
BioCentury BCIQLOC100287877
ClinGenLOC100287877
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100287877
Clinical trialLOC100287877
Miscellaneous
canSAR (ICR)LOC100287877 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100287877
EVEXLOC100287877
GoPubMedLOC100287877
iHOPLOC100287877
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:48:03 CET 2017

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