Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100287944 (uncharacterized LOC100287944)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100287944
Atlas_Id 66657
Location 12q23.3  [Link to chromosome band 12q23]
Location_base_pair Starts at 106496410 and ends at 106774831 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100287944  100287944  uncharacterized LOC100287944
Aliases
GeneCards (Weizmann)LOC100287944
Ensembl hg19 (Hinxton)ENSG00000257545 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000257545 [Gene_View]  chr12:106496410-106774831 [Contig_View]  LOC100287944 [Vega]
ICGC DataPortalENSG00000257545
TCGA cBioPortalLOC100287944
AceView (NCBI)LOC100287944
Genatlas (Paris)LOC100287944
WikiGenes100287944
SOURCE (Princeton)LOC100287944
Genetics Home Reference (NIH)LOC100287944
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100287944  -     chr12:106496410-106774831 -  12q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100287944  -     12q23.3   [Description]    (hg19-Feb_2009)
EnsemblLOC100287944 - 12q23.3 [CytoView hg19]  LOC100287944 - 12q23.3 [CytoView hg38]
Mapping of homologs : NCBILOC100287944 [Mapview hg19]  LOC100287944 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA250223
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100287944
Cluster EST : UnigeneHs.742087 [ NCBI ]
CGAP (NCI)Hs.742087
Alternative Splicing GalleryENSG00000257545
Gene ExpressionLOC100287944 [ NCBI-GEO ]   LOC100287944 [ EBI - ARRAY_EXPRESS ]   LOC100287944 [ SEEK ]   LOC100287944 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100287944 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100287944
GTEX Portal (Tissue expression)LOC100287944
Human Protein AtlasENSG00000257545-LOC100287944 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100287944
DMDM Disease mutations100287944
Blocks (Seattle)LOC100287944
Human Protein Atlas [tissue]ENSG00000257545-LOC100287944 [tissue]
Protein Interaction databases
FunCoupENSG00000257545
BioGRIDLOC100287944
STRING (EMBL)LOC100287944
ZODIACLOC100287944
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100287944
BioCentury BCIQLOC100287944
ClinGenLOC100287944
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100287944
Clinical trialLOC100287944
Miscellaneous
canSAR (ICR)LOC100287944 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100287944
EVEXLOC100287944
GoPubMedLOC100287944
iHOPLOC100287944
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:01:17 CET 2017

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