Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100288306 (uncharacterized LOC100288306)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100288306
Atlas_Id 66667
Location 5q23.2  [Link to chromosome band 5q23]
Location_base_pair Starts at 127035663 and ends at 127037495 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100288306  100288306  uncharacterized LOC100288306
Aliases
GeneCards (Weizmann)LOC100288306
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:127035663-127037495 [Contig_View]  LOC100288306 [Vega]
TCGA cBioPortalLOC100288306
AceView (NCBI)LOC100288306
Genatlas (Paris)LOC100288306
WikiGenes100288306
SOURCE (Princeton)LOC100288306
Genetics Home Reference (NIH)LOC100288306
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100288306  -     chr5:127035663-127037495 +  5q23.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100288306  -     5q23.2   [Description]    (hg19-Feb_2009)
EnsemblLOC100288306 - 5q23.2 [CytoView hg19]  LOC100288306 - 5q23.2 [CytoView hg38]
Mapping of homologs : NCBILOC100288306 [Mapview hg19]  LOC100288306 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AM231269
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100288306
Cluster EST : UnigeneHs.280745 [ NCBI ]
CGAP (NCI)Hs.280745
Gene ExpressionLOC100288306 [ NCBI-GEO ]   LOC100288306 [ EBI - ARRAY_EXPRESS ]   LOC100288306 [ SEEK ]   LOC100288306 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100288306 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100288306
GTEX Portal (Tissue expression)LOC100288306
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100288306
DMDM Disease mutations100288306
Blocks (Seattle)LOC100288306
IPIIPI00976527   
Protein Interaction databases
BioGRIDLOC100288306
STRING (EMBL)LOC100288306
ZODIACLOC100288306
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100288306
BioCentury BCIQLOC100288306
ClinGenLOC100288306
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100288306
Clinical trialLOC100288306
Miscellaneous
canSAR (ICR)LOC100288306 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100288306
EVEXLOC100288306
GoPubMedLOC100288306
iHOPLOC100288306
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:44:22 CET 2017

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