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LOC100288570 (glycosylphosphatidylinositol anchor attachment protein 1 homolog (yeast) pseudogene)

Identity

Alias (NCBI)-
HGNC (Hugo) -
LocusID (NCBI) 100288570
Atlas_Id 66674
Location 2q13  [Link to chromosome band 2q13]
Location_base_pair Starts at 109947690 and ends at 109968572 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100288570    glycosylphosphatidylinositol anchor attachment protein 1 homolog (yeast) pseudogene
Aliases
GeneCards (Weizmann)LOC100288570
Ensembl hg19 (Hinxton)ENSG00000184115 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000184115 [Gene_View]  ENSG00000184115 [Sequence]  chr2:109947690-109968572 [Contig_View]  LOC100288570 [Vega]
ICGC DataPortalENSG00000184115
TCGA cBioPortalLOC100288570
AceView (NCBI)LOC100288570
Genatlas (Paris)LOC100288570
SOURCE (Princeton)LOC100288570
Genetics Home Reference (NIH)LOC100288570
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100288570  -     chr2:109947690-109968572 +  2q13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100288570  -     2q13   [Description]    (hg19-Feb_2009)
GoldenPathLOC100288570 - 2q13 [CytoView hg19]  LOC100288570 - 2q13 [CytoView hg38]
ImmunoBaseENSG00000184115
Genome Data Viewer NCBILOC100288570 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)CB993644 OA987257
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100288570
Gene ExpressionLOC100288570 [ NCBI-GEO ]   LOC100288570 [ EBI - ARRAY_EXPRESS ]   LOC100288570 [ SEEK ]   LOC100288570 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100288570 [ Firebrowse - Broad ]
GenevisibleExpression of LOC100288570 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100288570
GTEX Portal (Tissue expression)LOC100288570
Human Protein AtlasENSG00000184115-LOC100288570 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100288570
Human Protein Atlas [tissue]ENSG00000184115-LOC100288570 [tissue]
Protein Interaction databases
BioGRIDLOC100288570
STRING (EMBL)LOC100288570
ZODIACLOC100288570
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
EVEXLOC100288570
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:01:30 CEST 2021

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