Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100288637 (OTU deubiquitinase 7A pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100288637
Atlas_Id 66676
Location 15q13.2  [Link to chromosome band 15q13]
Location_base_pair Starts at 30938318 and ends at 31065209 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100288637  100288637  OTU deubiquitinase 7A pseudogene
Aliases
GeneCards (Weizmann)LOC100288637
Ensembl hg19 (Hinxton)ENSG00000187951 [Gene_View]  chr15:30938318-31065209 [Contig_View]  LOC100288637 [Vega]
Ensembl hg38 (Hinxton)ENSG00000187951 [Gene_View]  chr15:30938318-31065209 [Contig_View]  LOC100288637 [Vega]
ICGC DataPortalENSG00000187951
TCGA cBioPortalLOC100288637
AceView (NCBI)LOC100288637
Genatlas (Paris)LOC100288637
WikiGenes100288637
SOURCE (Princeton)LOC100288637
Genetics Home Reference (NIH)LOC100288637
Genomic and cartography
GoldenPath hg19 (UCSC)LOC100288637  -     chr15:30938318-31065209 +  15q13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC100288637  -     15q13.2   [Description]    (hg38-Dec_2013)
EnsemblLOC100288637 - 15q13.2 [CytoView hg19]  LOC100288637 - 15q13.2 [CytoView hg38]
Mapping of homologs : NCBILOC100288637 [Mapview hg19]  LOC100288637 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK092283 AK095096 AL578899 BC112921 BX117689
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000015 NC_018926 NT_010194 NT_187660 NW_004929398 NW_011332701
Consensus coding sequences : CCDS (NCBI)LOC100288637
Cluster EST : UnigeneHs.668950 [ NCBI ]
CGAP (NCI)Hs.668950
Alternative Splicing GalleryENSG00000187951
Gene ExpressionLOC100288637 [ NCBI-GEO ]   LOC100288637 [ EBI - ARRAY_EXPRESS ]   LOC100288637 [ SEEK ]   LOC100288637 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100288637 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100288637
GTEX Portal (Tissue expression)LOC100288637
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100288637
DMDM Disease mutations100288637
Blocks (Seattle)LOC100288637
Human Protein AtlasENSG00000187951
IPIIPI00848318   
Protein Interaction databases
FunCoupENSG00000187951
BioGRIDLOC100288637
STRING (EMBL)LOC100288637
ZODIACLOC100288637
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100288637
BioCentury BCIQLOC100288637
ClinGenLOC100288637
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100288637
Clinical trialLOC100288637
Miscellaneous
canSAR (ICR)LOC100288637 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100288637
EVEXLOC100288637
GoPubMedLOC100288637
iHOPLOC100288637
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:16:33 CET 2017

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