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LOC100288656 (ankyrin repeat domain 20 family, member A2 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100288656
Atlas_Id 77207
Location 5q35.3  [Link to chromosome band 5q35]
Location_base_pair Starts at 177434223 and ends at 177435551 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100288656  100288656  ankyrin repeat domain 20 family, member A2 pseudogene
Aliases
GeneCards (Weizmann)LOC100288656
Ensembl hg19 (Hinxton) [Gene_View]  chr5:177434223-177435551 [Contig_View]  LOC100288656 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:177434223-177435551 [Contig_View]  LOC100288656 [Vega]
TCGA cBioPortalLOC100288656
AceView (NCBI)LOC100288656
Genatlas (Paris)LOC100288656
WikiGenes100288656
SOURCE (Princeton)LOC100288656
Genetics Home Reference (NIH)LOC100288656
Genomic and cartography
GoldenPath hg19 (UCSC)LOC100288656  -     chr5:177434223-177435551 +  5q35.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC100288656  -     5q35.3   [Description]    (hg38-Dec_2013)
EnsemblLOC100288656 - 5q35.3 [CytoView hg19]  LOC100288656 - 5q35.3 [CytoView hg38]
Mapping of homologs : NCBILOC100288656 [Mapview hg19]  LOC100288656 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL832872
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000005 NC_018916 NG_027512 NT_023133 NW_004929325
Consensus coding sequences : CCDS (NCBI)LOC100288656
Cluster EST : UnigeneHs.684417 [ NCBI ]
CGAP (NCI)Hs.684417
Gene ExpressionLOC100288656 [ NCBI-GEO ]   LOC100288656 [ EBI - ARRAY_EXPRESS ]   LOC100288656 [ SEEK ]   LOC100288656 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100288656 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100288656
GTEX Portal (Tissue expression)LOC100288656
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100288656
DMDM Disease mutations100288656
Blocks (Seattle)LOC100288656
Protein Interaction databases
BioGRIDLOC100288656
STRING (EMBL)LOC100288656
ZODIACLOC100288656
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100288656
BioCentury BCIQLOC100288656
ClinGenLOC100288656
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100288656
Clinical trialLOC100288656
Miscellaneous
canSAR (ICR)LOC100288656 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100288656
EVEXLOC100288656
GoPubMedLOC100288656
iHOPLOC100288656
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:16:33 CET 2017

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