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LOC100288778 (WAS protein family homolog 1 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100288778
Atlas_Id 66680
Location 12p13.33  [Link to chromosome band 12p13]
Location_base_pair Starts at 14477 and ends at 32015 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100288778  100288778  WAS protein family homolog 1 pseudogene
Aliases
GeneCards (Weizmann)LOC100288778
Ensembl hg19 (Hinxton)ENSG00000226210 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226210 [Gene_View]  chr12:14477-32015 [Contig_View]  LOC100288778 [Vega]
ICGC DataPortalENSG00000226210
TCGA cBioPortalLOC100288778
AceView (NCBI)LOC100288778
Genatlas (Paris)LOC100288778
WikiGenes100288778
SOURCE (Princeton)LOC100288778
Genetics Home Reference (NIH)LOC100288778
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100288778  -     chr12:14477-32015 -  12p13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100288778  -     12p13.33   [Description]    (hg19-Feb_2009)
EnsemblLOC100288778 - 12p13.33 [CytoView hg19]  LOC100288778 - 12p13.33 [CytoView hg38]
Mapping of homologs : NCBILOC100288778 [Mapview hg19]  LOC100288778 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW274219 AW881719 BC063682 BQ447519 CN404396
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100288778
Cluster EST : UnigeneHs.709408 [ NCBI ]
CGAP (NCI)Hs.709408
Alternative Splicing GalleryENSG00000226210
Gene ExpressionLOC100288778 [ NCBI-GEO ]   LOC100288778 [ EBI - ARRAY_EXPRESS ]   LOC100288778 [ SEEK ]   LOC100288778 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100288778 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100288778
GTEX Portal (Tissue expression)LOC100288778
Human Protein AtlasENSG00000226210-LOC100288778 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100288778
DMDM Disease mutations100288778
Blocks (Seattle)LOC100288778
Human Protein Atlas [tissue]ENSG00000226210-LOC100288778 [tissue]
Protein Interaction databases
FunCoupENSG00000226210
BioGRIDLOC100288778
STRING (EMBL)LOC100288778
ZODIACLOC100288778
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100288778
BioCentury BCIQLOC100288778
ClinGenLOC100288778
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100288778
Clinical trialLOC100288778
Miscellaneous
canSAR (ICR)LOC100288778 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100288778
EVEXLOC100288778
GoPubMedLOC100288778
iHOPLOC100288778
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:01:23 CET 2017

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