Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100288866 (uncharacterized LOC100288866)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100288866
Atlas_Id 66686
Location 17q21.33  [Link to chromosome band 17q21]
Location_base_pair Starts at 49505657 and ends at 49574064 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100288866  100288866  uncharacterized LOC100288866
Aliases
GeneCards (Weizmann)LOC100288866
Ensembl hg19 (Hinxton)ENSG00000249906 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249906 [Gene_View]  chr17:49505657-49574064 [Contig_View]  LOC100288866 [Vega]
ICGC DataPortalENSG00000249906
TCGA cBioPortalLOC100288866
AceView (NCBI)LOC100288866
Genatlas (Paris)LOC100288866
WikiGenes100288866
SOURCE (Princeton)LOC100288866
Genetics Home Reference (NIH)LOC100288866
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100288866  -     chr17:49505657-49574064 -  17q21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100288866  -     17q21.33   [Description]    (hg19-Feb_2009)
EnsemblLOC100288866 - 17q21.33 [CytoView hg19]  LOC100288866 - 17q21.33 [CytoView hg38]
Mapping of homologs : NCBILOC100288866 [Mapview hg19]  LOC100288866 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK303671
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100288866
Cluster EST : UnigeneHs.720309 [ NCBI ]
CGAP (NCI)Hs.720309
Alternative Splicing GalleryENSG00000249906
Gene ExpressionLOC100288866 [ NCBI-GEO ]   LOC100288866 [ EBI - ARRAY_EXPRESS ]   LOC100288866 [ SEEK ]   LOC100288866 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100288866 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100288866
GTEX Portal (Tissue expression)LOC100288866
Human Protein AtlasENSG00000249906-LOC100288866 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100288866
DMDM Disease mutations100288866
Blocks (Seattle)LOC100288866
Human Protein Atlas [tissue]ENSG00000249906-LOC100288866 [tissue]
Protein Interaction databases
FunCoupENSG00000249906
BioGRIDLOC100288866
STRING (EMBL)LOC100288866
ZODIACLOC100288866
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100288866
BioCentury BCIQLOC100288866
ClinGenLOC100288866
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100288866
Clinical trialLOC100288866
Miscellaneous
canSAR (ICR)LOC100288866 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100288866
EVEXLOC100288866
GoPubMedLOC100288866
iHOPLOC100288866
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:48:10 CET 2017

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