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LOC100289470 (chromosome 5 open reading frame 60 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100289470
Atlas_Id 77004
Location 5q35.3  [Link to chromosome band 5q35]
Location_base_pair Starts at 179522499 and ends at 179525172 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100289470  100289470  chromosome 5 open reading frame 60 pseudogene
Aliases
GeneCards (Weizmann)LOC100289470
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:179522499-179525172 [Contig_View]  LOC100289470 [Vega]
TCGA cBioPortalLOC100289470
AceView (NCBI)LOC100289470
Genatlas (Paris)LOC100289470
WikiGenes100289470
SOURCE (Princeton)LOC100289470
Genetics Home Reference (NIH)LOC100289470
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100289470  -     chr5:179522499-179525172 +  5q35.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100289470  -     5q35.3   [Description]    (hg19-Feb_2009)
EnsemblLOC100289470 - 5q35.3 [CytoView hg19]  LOC100289470 - 5q35.3 [CytoView hg38]
Mapping of homologs : NCBILOC100289470 [Mapview hg19]  LOC100289470 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK093197
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100289470
Cluster EST : UnigeneHs.631949 [ NCBI ]
CGAP (NCI)Hs.631949
Gene ExpressionLOC100289470 [ NCBI-GEO ]   LOC100289470 [ EBI - ARRAY_EXPRESS ]   LOC100289470 [ SEEK ]   LOC100289470 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100289470 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100289470
GTEX Portal (Tissue expression)LOC100289470
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100289470
DMDM Disease mutations100289470
Blocks (Seattle)LOC100289470
Protein Interaction databases
BioGRIDLOC100289470
STRING (EMBL)LOC100289470
ZODIACLOC100289470
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100289470
BioCentury BCIQLOC100289470
ClinGenLOC100289470
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100289470
Clinical trialLOC100289470
Miscellaneous
canSAR (ICR)LOC100289470 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100289470
EVEXLOC100289470
GoPubMedLOC100289470
iHOPLOC100289470
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:18:29 CEST 2017

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