Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100289673 (phosphoglycerate mutase family member 5 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100289673
Atlas_Id 66714
Location 5q21.3  [Link to chromosome band 5q21]
Location_base_pair Starts at 109218883 and ends at 109221200 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100289673  100289673  phosphoglycerate mutase family member 5 pseudogene
Aliases
GeneCards (Weizmann)LOC100289673
Ensembl hg19 (Hinxton) [Gene_View]  chr5:109218883-109221200 [Contig_View]  LOC100289673 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:109218883-109221200 [Contig_View]  LOC100289673 [Vega]
TCGA cBioPortalLOC100289673
AceView (NCBI)LOC100289673
Genatlas (Paris)LOC100289673
WikiGenes100289673
SOURCE (Princeton)LOC100289673
Genetics Home Reference (NIH)LOC100289673
Genomic and cartography
GoldenPath hg19 (UCSC)LOC100289673  -     chr5:109218883-109221200 +  5q21.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC100289673  -     5q21.3   [Description]    (hg38-Dec_2013)
EnsemblLOC100289673 - 5q21.3 [CytoView hg19]  LOC100289673 - 5q21.3 [CytoView hg38]
Mapping of homologs : NCBILOC100289673 [Mapview hg19]  LOC100289673 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI125295 AI216275 BX093587 LN608062
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_034772 NW_004929323
Consensus coding sequences : CCDS (NCBI)LOC100289673
Cluster EST : UnigeneHs.368405 [ NCBI ]
CGAP (NCI)Hs.368405
Gene ExpressionLOC100289673 [ NCBI-GEO ]   LOC100289673 [ EBI - ARRAY_EXPRESS ]   LOC100289673 [ SEEK ]   LOC100289673 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100289673 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100289673
GTEX Portal (Tissue expression)LOC100289673
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100289673
DMDM Disease mutations100289673
Blocks (Seattle)LOC100289673
Protein Interaction databases
BioGRIDLOC100289673
STRING (EMBL)LOC100289673
ZODIACLOC100289673
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100289673
BioCentury BCIQLOC100289673
ClinGenLOC100289673
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100289673
Clinical trialLOC100289673
Miscellaneous
canSAR (ICR)LOC100289673 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100289673
EVEXLOC100289673
GoPubMedLOC100289673
iHOPLOC100289673
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:16:41 CET 2017

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