Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100294145 (uncharacterized LOC100294145)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100294145
Atlas_Id 66720
Location 6p21.32  [Link to chromosome band 6p21]
Location_base_pair Starts at 32894176 and ends at 32903758 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100294145  100294145  uncharacterized LOC100294145
Aliases
GeneCards (Weizmann)LOC100294145
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:32894176-32903758 [Contig_View]  LOC100294145 [Vega]
TCGA cBioPortalLOC100294145
AceView (NCBI)LOC100294145
Genatlas (Paris)LOC100294145
WikiGenes100294145
SOURCE (Princeton)LOC100294145
Genetics Home Reference (NIH)LOC100294145
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100294145  -     chr6:32894176-32903758 +  6p21.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100294145  -     6p21.32   [Description]    (hg19-Feb_2009)
EnsemblLOC100294145 - 6p21.32 [CytoView hg19]  LOC100294145 - 6p21.32 [CytoView hg38]
Mapping of homologs : NCBILOC100294145 [Mapview hg19]  LOC100294145 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ420487 AK057104
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000006 NC_018917 NT_113891 NT_167244 NT_167245 NT_167246 NT_167247 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)LOC100294145
Cluster EST : UnigeneHs.559456 [ NCBI ]
CGAP (NCI)Hs.559456
Gene ExpressionLOC100294145 [ NCBI-GEO ]   LOC100294145 [ EBI - ARRAY_EXPRESS ]   LOC100294145 [ SEEK ]   LOC100294145 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100294145 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100294145
GTEX Portal (Tissue expression)LOC100294145
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100294145
DMDM Disease mutations100294145
Blocks (Seattle)LOC100294145
Protein Interaction databases
BioGRIDLOC100294145
STRING (EMBL)LOC100294145
ZODIACLOC100294145
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100294145
BioCentury BCIQLOC100294145
ClinGenLOC100294145
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100294145
Clinical trialLOC100294145
Miscellaneous
canSAR (ICR)LOC100294145 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100294145
EVEXLOC100294145
GoPubMedLOC100294145
iHOPLOC100294145
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:00:25 CEST 2018

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