Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100419170 (toll like receptor 2 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100419170
Atlas_Id 78037
Location 4q31.3  [Link to chromosome band 4q31]
Location_base_pair Starts at 153640168 and ends at 153681180 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100419170  100419170  toll like receptor 2 pseudogene
Aliases
GeneCards (Weizmann)LOC100419170
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr4:153640168-153681180 [Contig_View]  LOC100419170 [Vega]
TCGA cBioPortalLOC100419170
AceView (NCBI)LOC100419170
Genatlas (Paris)LOC100419170
WikiGenes100419170
SOURCE (Princeton)LOC100419170
Genetics Home Reference (NIH)LOC100419170
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100419170  -     chr4:153640168-153681180 +  4q31.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100419170  -     4q31.3   [Description]    (hg19-Feb_2009)
EnsemblLOC100419170 - 4q31.3 [CytoView hg19]  LOC100419170 - 4q31.3 [CytoView hg38]
Mapping of homologs : NCBILOC100419170 [Mapview hg19]  LOC100419170 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC032464
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100419170
Cluster EST : UnigeneHs.382102 [ NCBI ]
CGAP (NCI)Hs.382102
Gene ExpressionLOC100419170 [ NCBI-GEO ]   LOC100419170 [ EBI - ARRAY_EXPRESS ]   LOC100419170 [ SEEK ]   LOC100419170 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100419170 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100419170
GTEX Portal (Tissue expression)LOC100419170
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100419170
DMDM Disease mutations100419170
Blocks (Seattle)LOC100419170
Protein Interaction databases
BioGRIDLOC100419170
STRING (EMBL)LOC100419170
ZODIACLOC100419170
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100419170
BioCentury BCIQLOC100419170
ClinGenLOC100419170
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100419170
Clinical trialLOC100419170
Miscellaneous
canSAR (ICR)LOC100419170 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100419170
EVEXLOC100419170
GoPubMedLOC100419170
iHOPLOC100419170
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:18:32 CEST 2017

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