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LOC100419583 (ring finger protein 4 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100419583
Atlas_Id 66725
Location 15q21.1  [Link to chromosome band 15q21]
Location_base_pair Starts at 44728988 and ends at 44732851 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100419583  100419583  ring finger protein 4 pseudogene
Aliases
GeneCards (Weizmann)LOC100419583
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr15:44728988-44732851 [Contig_View]  LOC100419583 [Vega]
TCGA cBioPortalLOC100419583
AceView (NCBI)LOC100419583
Genatlas (Paris)LOC100419583
WikiGenes100419583
SOURCE (Princeton)LOC100419583
Genetics Home Reference (NIH)LOC100419583
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100419583  -     chr15:44728988-44732851 +  15q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100419583  -     15q21.1   [Description]    (hg19-Feb_2009)
EnsemblLOC100419583 - 15q21.1 [CytoView hg19]  LOC100419583 - 15q21.1 [CytoView hg38]
Mapping of homologs : NCBILOC100419583 [Mapview hg19]  LOC100419583 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK311550 BC031266 BM666006 CF145819 DC350419
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000015 NC_018926 NG_025381 NT_187605
Consensus coding sequences : CCDS (NCBI)LOC100419583
Cluster EST : UnigeneHs.489254 [ NCBI ]
CGAP (NCI)Hs.489254
Gene ExpressionLOC100419583 [ NCBI-GEO ]   LOC100419583 [ EBI - ARRAY_EXPRESS ]   LOC100419583 [ SEEK ]   LOC100419583 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100419583 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100419583
GTEX Portal (Tissue expression)LOC100419583
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100419583
DMDM Disease mutations100419583
Blocks (Seattle)LOC100419583
Protein Interaction databases
BioGRIDLOC100419583
STRING (EMBL)LOC100419583
ZODIACLOC100419583
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100419583
BioCentury BCIQLOC100419583
ClinGenLOC100419583
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100419583
Clinical trialLOC100419583
Miscellaneous
canSAR (ICR)LOC100419583 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100419583
EVEXLOC100419583
GoPubMedLOC100419583
iHOPLOC100419583
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:48:19 CET 2017

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