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LOC100420587 (SHC binding and spindle associated 1 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100420587
Atlas_Id 66726
Location 19q12  [Link to chromosome band 19q12]
Location_base_pair Starts at 28435389 and ends at 28727694 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100420587  100420587  SHC binding and spindle associated 1 pseudogene
Aliases
GeneCards (Weizmann)LOC100420587
Ensembl hg19 (Hinxton)ENSG00000267243 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000267243 [Gene_View]  chr19:28435389-28727694 [Contig_View]  LOC100420587 [Vega]
ICGC DataPortalENSG00000267243
TCGA cBioPortalLOC100420587
AceView (NCBI)LOC100420587
Genatlas (Paris)LOC100420587
WikiGenes100420587
SOURCE (Princeton)LOC100420587
Genetics Home Reference (NIH)LOC100420587
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100420587  -     chr19:28435389-28727694 -  19q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100420587  -     19q12   [Description]    (hg19-Feb_2009)
EnsemblLOC100420587 - 19q12 [CytoView hg19]  LOC100420587 - 19q12 [CytoView hg38]
Mapping of homologs : NCBILOC100420587 [Mapview hg19]  LOC100420587 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC068609 DB120589 HY016521
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100420587
Cluster EST : UnigeneHs.569956 [ NCBI ]
CGAP (NCI)Hs.569956
Alternative Splicing GalleryENSG00000267243
Gene ExpressionLOC100420587 [ NCBI-GEO ]   LOC100420587 [ EBI - ARRAY_EXPRESS ]   LOC100420587 [ SEEK ]   LOC100420587 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100420587 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100420587
GTEX Portal (Tissue expression)LOC100420587
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100420587
DMDM Disease mutations100420587
Blocks (Seattle)LOC100420587
Human Protein AtlasENSG00000267243
Protein Interaction databases
FunCoupENSG00000267243
BioGRIDLOC100420587
STRING (EMBL)LOC100420587
ZODIACLOC100420587
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100420587
BioCentury BCIQLOC100420587
ClinGenLOC100420587
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100420587
Clinical trialLOC100420587
Miscellaneous
canSAR (ICR)LOC100420587 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100420587
EVEXLOC100420587
GoPubMedLOC100420587
iHOPLOC100420587
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 16:02:13 CEST 2017

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