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LOC100421561 (family with sequence similarity 133 member B pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100421561
Atlas_Id 78753
Location 5q12.1  [Link to chromosome band 5q12]
Location_base_pair Starts at 61375052 and ends at 61376439 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100421561  100421561  family with sequence similarity 133 member B pseudogene
Aliases
GeneCards (Weizmann)LOC100421561
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:61375052-61376439 [Contig_View]  LOC100421561 [Vega]
TCGA cBioPortalLOC100421561
AceView (NCBI)LOC100421561
Genatlas (Paris)LOC100421561
WikiGenes100421561
SOURCE (Princeton)LOC100421561
Genetics Home Reference (NIH)LOC100421561
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100421561  -     chr5:61375052-61376439 +  5q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100421561  -     5q12.1   [Description]    (hg19-Feb_2009)
EnsemblLOC100421561 - 5q12.1 [CytoView hg19]  LOC100421561 - 5q12.1 [CytoView hg38]
Mapping of homologs : NCBILOC100421561 [Mapview hg19]  LOC100421561 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC157872
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100421561
Cluster EST : UnigeneHs.18564 [ NCBI ]
CGAP (NCI)Hs.18564
Gene ExpressionLOC100421561 [ NCBI-GEO ]   LOC100421561 [ EBI - ARRAY_EXPRESS ]   LOC100421561 [ SEEK ]   LOC100421561 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100421561 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100421561
GTEX Portal (Tissue expression)LOC100421561
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100421561
DMDM Disease mutations100421561
Blocks (Seattle)LOC100421561
Protein Interaction databases
BioGRIDLOC100421561
STRING (EMBL)LOC100421561
ZODIACLOC100421561
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100421561
BioCentury BCIQLOC100421561
ClinGenLOC100421561
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100421561
Clinical trialLOC100421561
Miscellaneous
canSAR (ICR)LOC100421561 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100421561
EVEXLOC100421561
GoPubMedLOC100421561
iHOPLOC100421561
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:48:21 CET 2017

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