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LOC100422737 (uncharacterized LOC100422737)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100422737
Atlas_Id 66729
Location 6q21  [Link to chromosome band 6q21]
Location_base_pair Starts at 106717452 and ends at 106787425 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100422737  100422737  uncharacterized LOC100422737
Aliases
GeneCards (Weizmann)LOC100422737
Ensembl hg19 (Hinxton)ENSG00000235142 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235142 [Gene_View]  ENSG00000235142 [Sequence]  chr6:106717452-106787425 [Contig_View]  LOC100422737 [Vega]
ICGC DataPortalENSG00000235142
TCGA cBioPortalLOC100422737
AceView (NCBI)LOC100422737
Genatlas (Paris)LOC100422737
WikiGenes100422737
SOURCE (Princeton)LOC100422737
Genetics Home Reference (NIH)LOC100422737
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100422737  -     chr6:106717452-106787425 -  6q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100422737  -     6q21   [Description]    (hg19-Feb_2009)
EnsemblLOC100422737 - 6q21 [CytoView hg19]  LOC100422737 - 6q21 [CytoView hg38]
Mapping of homologs : NCBILOC100422737 [Mapview hg19]  LOC100422737 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ420564 AK025967 AK124400
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100422737
Cluster EST : UnigeneHs.634681 [ NCBI ]
CGAP (NCI)Hs.634681
Alternative Splicing GalleryENSG00000235142
Gene ExpressionLOC100422737 [ NCBI-GEO ]   LOC100422737 [ EBI - ARRAY_EXPRESS ]   LOC100422737 [ SEEK ]   LOC100422737 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100422737 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100422737
GTEX Portal (Tissue expression)LOC100422737
Human Protein AtlasENSG00000235142-LOC100422737 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100422737
DMDM Disease mutations100422737
Blocks (Seattle)LOC100422737
Human Protein Atlas [tissue]ENSG00000235142-LOC100422737 [tissue]
IPIIPI00981475   
Protein Interaction databases
FunCoupENSG00000235142
BioGRIDLOC100422737
STRING (EMBL)LOC100422737
ZODIACLOC100422737
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100422737
BioCentury BCIQLOC100422737
ClinGenLOC100422737
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100422737
Clinical trialLOC100422737
Miscellaneous
canSAR (ICR)LOC100422737 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100422737
EVEXLOC100422737
GoPubMedLOC100422737
iHOPLOC100422737
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:00:30 CEST 2018

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