Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100499484-C9ORF174 (LOC100499484-C9orf174 readthrough)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 57653
Atlas_Id 66733
Location 9q22.33  [Link to chromosome band 9q22]
Location_base_pair Starts at 100000708 and ends at 100139577 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100499484-C9ORF174  57653  LOC100499484-C9orf174 readthrough
Aliases
GeneCards (Weizmann)LOC100499484-C9ORF174
Ensembl hg19 (Hinxton) [Gene_View]  chr9:100000708-100139577 [Contig_View]  LOC100499484-C9ORF174 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr9:100000708-100139577 [Contig_View]  LOC100499484-C9ORF174 [Vega]
TCGA cBioPortalLOC100499484-C9ORF174
AceView (NCBI)LOC100499484-C9ORF174
Genatlas (Paris)LOC100499484-C9ORF174
WikiGenes57653
SOURCE (Princeton)LOC100499484-C9ORF174
Genetics Home Reference (NIH)LOC100499484-C9ORF174
Genomic and cartography
GoldenPath hg19 (UCSC)LOC100499484-C9ORF174  -     chr9:100000708-100139577 +  9q22.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC100499484-C9ORF174  -     9q22.33   [Description]    (hg38-Dec_2013)
EnsemblLOC100499484-C9ORF174 - 9q22.33 [CytoView hg19]  LOC100499484-C9ORF174 - 9q22.33 [CytoView hg38]
Mapping of homologs : NCBILOC100499484-C9ORF174 [Mapview hg19]  LOC100499484-C9ORF174 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000009 NC_018920 NT_008470 NW_004929366
Consensus coding sequences : CCDS (NCBI)LOC100499484-C9ORF174
Cluster EST : UnigeneHs.435629 [ NCBI ]
CGAP (NCI)Hs.435629
Gene ExpressionLOC100499484-C9ORF174 [ NCBI-GEO ]   LOC100499484-C9ORF174 [ EBI - ARRAY_EXPRESS ]   LOC100499484-C9ORF174 [ SEEK ]   LOC100499484-C9ORF174 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100499484-C9ORF174 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)57653
GTEX Portal (Tissue expression)LOC100499484-C9ORF174
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100499484-C9ORF174
DMDM Disease mutations57653
Blocks (Seattle)LOC100499484-C9ORF174
HPRD11152
IPIIPI00985083   
Protein Interaction databases
BioGRIDLOC100499484-C9ORF174
STRING (EMBL)LOC100499484-C9ORF174
ZODIACLOC100499484-C9ORF174
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease57653
BioCentury BCIQLOC100499484-C9ORF174
ClinGenLOC100499484-C9ORF174
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57653
Chemical/Pharm GKB GenePA165585576
Clinical trialLOC100499484-C9ORF174
Miscellaneous
canSAR (ICR)LOC100499484-C9ORF174 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100499484-C9ORF174
EVEXLOC100499484-C9ORF174
GoPubMedLOC100499484-C9ORF174
iHOPLOC100499484-C9ORF174
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:16:48 CET 2017

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