Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100505625 (uncharacterized LOC100505625)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100505625
Atlas_Id 66744
Location 5p15.31  [Link to chromosome band 5p15]
Location_base_pair Starts at 6686438 and ends at 6707824 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100505625  100505625  uncharacterized LOC100505625
Aliases
GeneCards (Weizmann)LOC100505625
Ensembl hg19 (Hinxton)ENSG00000248677 [Gene_View]  chr5:6686438-6707824 [Contig_View]  LOC100505625 [Vega]
Ensembl hg38 (Hinxton)ENSG00000248677 [Gene_View]  chr5:6686438-6707824 [Contig_View]  LOC100505625 [Vega]
ICGC DataPortalENSG00000248677
TCGA cBioPortalLOC100505625
AceView (NCBI)LOC100505625
Genatlas (Paris)LOC100505625
WikiGenes100505625
SOURCE (Princeton)LOC100505625
Genetics Home Reference (NIH)LOC100505625
Genomic and cartography
GoldenPath hg19 (UCSC)LOC100505625  -     chr5:6686438-6707824 -  5p15.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC100505625  -     5p15.31   [Description]    (hg38-Dec_2013)
EnsemblLOC100505625 - 5p15.31 [CytoView hg19]  LOC100505625 - 5p15.31 [CytoView hg38]
Mapping of homologs : NCBILOC100505625 [Mapview hg19]  LOC100505625 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK126802 HG497716
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_006576 NW_004929321
Consensus coding sequences : CCDS (NCBI)LOC100505625
Cluster EST : UnigeneHs.550028 [ NCBI ]
CGAP (NCI)Hs.550028
Alternative Splicing GalleryENSG00000248677
Gene ExpressionLOC100505625 [ NCBI-GEO ]   LOC100505625 [ EBI - ARRAY_EXPRESS ]   LOC100505625 [ SEEK ]   LOC100505625 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100505625 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505625
GTEX Portal (Tissue expression)LOC100505625
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100505625
DMDM Disease mutations100505625
Blocks (Seattle)LOC100505625
Human Protein AtlasENSG00000248677
Protein Interaction databases
FunCoupENSG00000248677
BioGRIDLOC100505625
STRING (EMBL)LOC100505625
ZODIACLOC100505625
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100505625
BioCentury BCIQLOC100505625
ClinGenLOC100505625
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505625
Clinical trialLOC100505625
Miscellaneous
canSAR (ICR)LOC100505625 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100505625
EVEXLOC100505625
GoPubMedLOC100505625
iHOPLOC100505625
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:16:51 CET 2017

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