Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100505635 (uncharacterized LOC100505635)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100505635
Atlas_Id 66745
Location 6p21.2  [Link to chromosome band 6p21]
Location_base_pair Starts at 39888790 and ends at 39897380 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100505635  100505635  uncharacterized LOC100505635
Aliases
GeneCards (Weizmann)LOC100505635
Ensembl hg19 (Hinxton)ENSG00000235033 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235033 [Gene_View]  ENSG00000235033 [Sequence]  chr6:39888790-39897380 [Contig_View]  LOC100505635 [Vega]
ICGC DataPortalENSG00000235033
TCGA cBioPortalLOC100505635
AceView (NCBI)LOC100505635
Genatlas (Paris)LOC100505635
WikiGenes100505635
SOURCE (Princeton)LOC100505635
Genetics Home Reference (NIH)LOC100505635
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100505635  -     chr6:39888790-39897380 -  6p21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100505635  -     6p21.2   [Description]    (hg19-Feb_2009)
EnsemblLOC100505635 - 6p21.2 [CytoView hg19]  LOC100505635 - 6p21.2 [CytoView hg38]
Mapping of homologs : NCBILOC100505635 [Mapview hg19]  LOC100505635 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK091770 AK125892 AL079669 DA315022
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100505635
Cluster EST : UnigeneHs.668513 [ NCBI ]
CGAP (NCI)Hs.668513
Alternative Splicing GalleryENSG00000235033
Gene ExpressionLOC100505635 [ NCBI-GEO ]   LOC100505635 [ EBI - ARRAY_EXPRESS ]   LOC100505635 [ SEEK ]   LOC100505635 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100505635 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505635
GTEX Portal (Tissue expression)LOC100505635
Human Protein AtlasENSG00000235033-LOC100505635 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100505635
DMDM Disease mutations100505635
Blocks (Seattle)LOC100505635
Human Protein Atlas [tissue]ENSG00000235033-LOC100505635 [tissue]
Protein Interaction databases
FunCoupENSG00000235033
BioGRIDLOC100505635
STRING (EMBL)LOC100505635
ZODIACLOC100505635
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100505635
BioCentury BCIQLOC100505635
ClinGenLOC100505635
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505635
Clinical trialLOC100505635
Miscellaneous
canSAR (ICR)LOC100505635 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100505635
EVEXLOC100505635
GoPubMedLOC100505635
iHOPLOC100505635
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:00:34 CEST 2018

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