Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100505664 (uncharacterized LOC100505664)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100505664
Atlas_Id 77654
Location 20p11.21  [Link to chromosome band 20p11]
Location_base_pair Starts at 23187961 and ends at 23190305 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100505664  100505664  uncharacterized LOC100505664
Aliases
GeneCards (Weizmann)LOC100505664
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr20:23187961-23190305 [Contig_View]  LOC100505664 [Vega]
TCGA cBioPortalLOC100505664
AceView (NCBI)LOC100505664
Genatlas (Paris)LOC100505664
WikiGenes100505664
SOURCE (Princeton)LOC100505664
Genetics Home Reference (NIH)LOC100505664
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100505664  -     chr20:23187961-23190305 +  20p11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100505664  -     20p11.21   [Description]    (hg19-Feb_2009)
EnsemblLOC100505664 - 20p11.21 [CytoView hg19]  LOC100505664 - 20p11.21 [CytoView hg38]
Mapping of homologs : NCBILOC100505664 [Mapview hg19]  LOC100505664 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK091765
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100505664
Cluster EST : UnigeneHs.120058 [ NCBI ]
CGAP (NCI)Hs.120058
Gene ExpressionLOC100505664 [ NCBI-GEO ]   LOC100505664 [ EBI - ARRAY_EXPRESS ]   LOC100505664 [ SEEK ]   LOC100505664 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100505664 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505664
GTEX Portal (Tissue expression)LOC100505664
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100505664
DMDM Disease mutations100505664
Blocks (Seattle)LOC100505664
Protein Interaction databases
BioGRIDLOC100505664
STRING (EMBL)LOC100505664
ZODIACLOC100505664
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100505664
BioCentury BCIQLOC100505664
ClinGenLOC100505664
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505664
Clinical trialLOC100505664
Miscellaneous
canSAR (ICR)LOC100505664 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100505664
EVEXLOC100505664
GoPubMedLOC100505664
iHOPLOC100505664
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:48:26 CET 2017

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