Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100505795 (uncharacterized LOC100505795)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100505795
Atlas_Id 66754
Location 1q23.3  [Link to chromosome band 1q23]
Location_base_pair Starts at 164769116 and ends at 164774641 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100505795  100505795  uncharacterized LOC100505795
Aliases
GeneCards (Weizmann)LOC100505795
Ensembl hg19 (Hinxton)ENSG00000233693 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233693 [Gene_View]  chr1:164769116-164774641 [Contig_View]  LOC100505795 [Vega]
ICGC DataPortalENSG00000233693
TCGA cBioPortalLOC100505795
AceView (NCBI)LOC100505795
Genatlas (Paris)LOC100505795
WikiGenes100505795
SOURCE (Princeton)LOC100505795
Genetics Home Reference (NIH)LOC100505795
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100505795  -     chr1:164769116-164774641 -  1q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100505795  -     1q23.3   [Description]    (hg19-Feb_2009)
EnsemblLOC100505795 - 1q23.3 [CytoView hg19]  LOC100505795 - 1q23.3 [CytoView hg38]
Mapping of homologs : NCBILOC100505795 [Mapview hg19]  LOC100505795 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK124128
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100505795
Cluster EST : UnigeneHs.661039 [ NCBI ]
CGAP (NCI)Hs.661039
Alternative Splicing GalleryENSG00000233693
Gene ExpressionLOC100505795 [ NCBI-GEO ]   LOC100505795 [ EBI - ARRAY_EXPRESS ]   LOC100505795 [ SEEK ]   LOC100505795 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100505795 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505795
GTEX Portal (Tissue expression)LOC100505795
Human Protein AtlasENSG00000233693-LOC100505795 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100505795
DMDM Disease mutations100505795
Blocks (Seattle)LOC100505795
Human Protein Atlas [tissue]ENSG00000233693-LOC100505795 [tissue]
Protein Interaction databases
FunCoupENSG00000233693
BioGRIDLOC100505795
STRING (EMBL)LOC100505795
ZODIACLOC100505795
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100505795
BioCentury BCIQLOC100505795
ClinGenLOC100505795
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505795
Clinical trialLOC100505795
Miscellaneous
canSAR (ICR)LOC100505795 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100505795
EVEXLOC100505795
GoPubMedLOC100505795
iHOPLOC100505795
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:01:42 CET 2017

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