Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC100505841 (zinc finger protein 474-like)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100505841
Atlas_Id 66758
Location 5q23.2  [Link to chromosome band 5q23]
Location_base_pair Starts at 122160176 and ends at 122182663 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100505841  100505841  zinc finger protein 474-like
Aliases
GeneCards (Weizmann)LOC100505841
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:122160176-122182663 [Contig_View]  LOC100505841 [Vega]
TCGA cBioPortalLOC100505841
AceView (NCBI)LOC100505841
Genatlas (Paris)LOC100505841
WikiGenes100505841
SOURCE (Princeton)LOC100505841
Genetics Home Reference (NIH)LOC100505841
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100505841  -     chr5:122160176-122182663 +  5q23.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100505841  -     5q23.2   [Description]    (hg19-Feb_2009)
EnsemblLOC100505841 - 5q23.2 [CytoView hg19]  LOC100505841 - 5q23.2 [CytoView hg38]
Mapping of homologs : NCBILOC100505841 [Mapview hg19]  LOC100505841 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI188208 BU567915
RefSeq transcript (Entrez)NM_001195535
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100505841
Cluster EST : UnigeneHs.733368 [ NCBI ]
CGAP (NCI)Hs.733368
Gene ExpressionLOC100505841 [ NCBI-GEO ]   LOC100505841 [ EBI - ARRAY_EXPRESS ]   LOC100505841 [ SEEK ]   LOC100505841 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100505841 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505841
GTEX Portal (Tissue expression)LOC100505841
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100505841
DMDM Disease mutations100505841
Blocks (Seattle)LOC100505841
Protein Interaction databases
BioGRIDLOC100505841
STRING (EMBL)LOC100505841
ZODIACLOC100505841
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100505841
BioCentury BCIQLOC100505841
ClinGenLOC100505841
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505841
Clinical trialLOC100505841
Miscellaneous
canSAR (ICR)LOC100505841 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100505841
EVEXLOC100505841
GoPubMedLOC100505841
iHOPLOC100505841
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:48:29 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.