Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100505920 (uncharacterized LOC100505920)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100505920
Atlas_Id 66765
Location 3q29  [Link to chromosome band 3q29]
Location_base_pair Starts at 193920805 and ends at 193967942 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100505920  100505920  uncharacterized LOC100505920
Aliases
GeneCards (Weizmann)LOC100505920
Ensembl hg19 (Hinxton)ENSG00000225742 [Gene_View]  chr3:193920805-193967942 [Contig_View]  LOC100505920 [Vega]
Ensembl hg38 (Hinxton)ENSG00000225742 [Gene_View]  chr3:193920805-193967942 [Contig_View]  LOC100505920 [Vega]
ICGC DataPortalENSG00000225742
TCGA cBioPortalLOC100505920
AceView (NCBI)LOC100505920
Genatlas (Paris)LOC100505920
WikiGenes100505920
SOURCE (Princeton)LOC100505920
Genetics Home Reference (NIH)LOC100505920
Genomic and cartography
GoldenPath hg19 (UCSC)LOC100505920  -     chr3:193920805-193967942 -  3q29   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC100505920  -     3q29   [Description]    (hg38-Dec_2013)
EnsemblLOC100505920 - 3q29 [CytoView hg19]  LOC100505920 - 3q29 [CytoView hg38]
Mapping of homologs : NCBILOC100505920 [Mapview hg19]  LOC100505920 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA385277 BM712901 HG496515 HG496516
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)LOC100505920
Cluster EST : UnigeneHs.436654 [ NCBI ]
CGAP (NCI)Hs.436654
Alternative Splicing GalleryENSG00000225742
Gene ExpressionLOC100505920 [ NCBI-GEO ]   LOC100505920 [ EBI - ARRAY_EXPRESS ]   LOC100505920 [ SEEK ]   LOC100505920 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100505920 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505920
GTEX Portal (Tissue expression)LOC100505920
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100505920
DMDM Disease mutations100505920
Blocks (Seattle)LOC100505920
Human Protein AtlasENSG00000225742
Protein Interaction databases
FunCoupENSG00000225742
BioGRIDLOC100505920
STRING (EMBL)LOC100505920
ZODIACLOC100505920
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100505920
BioCentury BCIQLOC100505920
ClinGenLOC100505920
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505920
Clinical trialLOC100505920
Miscellaneous
canSAR (ICR)LOC100505920 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100505920
EVEXLOC100505920
GoPubMedLOC100505920
iHOPLOC100505920
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:16:56 CET 2017

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