Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100506142 (uncharacterized LOC100506142)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100506142
Atlas_Id 66787
Location 2p21  [Link to chromosome band 2p21]
Location_base_pair Starts at 46568257 and ends at 46580238 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100506142  100506142  uncharacterized LOC100506142
Aliases
GeneCards (Weizmann)LOC100506142
Ensembl hg19 (Hinxton)ENSG00000250116 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250116 [Gene_View]  chr2:46568257-46580238 [Contig_View]  LOC100506142 [Vega]
ICGC DataPortalENSG00000250116
TCGA cBioPortalLOC100506142
AceView (NCBI)LOC100506142
Genatlas (Paris)LOC100506142
WikiGenes100506142
SOURCE (Princeton)LOC100506142
Genetics Home Reference (NIH)LOC100506142
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100506142  -     chr2:46568257-46580238 -  2p21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100506142  -     2p21   [Description]    (hg19-Feb_2009)
EnsemblLOC100506142 - 2p21 [CytoView hg19]  LOC100506142 - 2p21 [CytoView hg38]
Mapping of homologs : NCBILOC100506142 [Mapview hg19]  LOC100506142 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC039392 BC048424
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100506142
Cluster EST : UnigeneHs.658541 [ NCBI ]
CGAP (NCI)Hs.658541
Alternative Splicing GalleryENSG00000250116
Gene ExpressionLOC100506142 [ NCBI-GEO ]   LOC100506142 [ EBI - ARRAY_EXPRESS ]   LOC100506142 [ SEEK ]   LOC100506142 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100506142 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506142
GTEX Portal (Tissue expression)LOC100506142
Human Protein AtlasENSG00000250116-LOC100506142 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100506142
DMDM Disease mutations100506142
Blocks (Seattle)LOC100506142
Human Protein Atlas [tissue]ENSG00000250116-LOC100506142 [tissue]
Protein Interaction databases
FunCoupENSG00000250116
BioGRIDLOC100506142
STRING (EMBL)LOC100506142
ZODIACLOC100506142
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100506142
BioCentury BCIQLOC100506142
ClinGenLOC100506142
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506142
Clinical trialLOC100506142
Miscellaneous
canSAR (ICR)LOC100506142 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100506142
EVEXLOC100506142
GoPubMedLOC100506142
iHOPLOC100506142
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:44:54 CET 2017

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