Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100506188 (uncharacterized LOC100506188)

Identity

Alias (NCBI)-
HGNC (Hugo) -
LocusID (NCBI) 100506188
Atlas_Id 66791
Location 6p11.2  [Link to chromosome band 6p11]
Location_base_pair Starts at 57260524 and ends at 57263346 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100506188    uncharacterized LOC100506188
Aliases
GeneCards (Weizmann)LOC100506188
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:57260524-57263346 [Contig_View]  LOC100506188 [Vega]
TCGA cBioPortalLOC100506188
AceView (NCBI)LOC100506188
Genatlas (Paris)LOC100506188
SOURCE (Princeton)LOC100506188
Genetics Home Reference (NIH)LOC100506188
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100506188  -     chr6:57260524-57263346 -  6p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100506188  -     6p11.2   [Description]    (hg19-Feb_2009)
GoldenPathLOC100506188 - 6p11.2 [CytoView hg19]  LOC100506188 - 6p11.2 [CytoView hg38]
Genome Data Viewer NCBILOC100506188 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI041654 BX379795 BX389603 DA108966
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100506188
Gene ExpressionLOC100506188 [ NCBI-GEO ]   LOC100506188 [ EBI - ARRAY_EXPRESS ]   LOC100506188 [ SEEK ]   LOC100506188 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100506188 [ Firebrowse - Broad ]
GenevisibleExpression of LOC100506188 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100506188
GTEX Portal (Tissue expression)LOC100506188
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100506188
Protein Interaction databases
BioGRIDLOC100506188
STRING (EMBL)LOC100506188
ZODIACLOC100506188
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLOC100506188
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:01:44 CEST 2021

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