Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LOC100506188 (uncharacterized LOC100506188)


Alias (NCBI)-
HGNC (Hugo) -
LocusID (NCBI) 100506188
Atlas_Id 66791
Location 6p11.2  [Link to chromosome band 6p11]
Location_base_pair Starts at 57260524 and ends at 57263346 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)-   -
Entrez_Gene (NCBI)LOC100506188    uncharacterized LOC100506188
GeneCards (Weizmann)LOC100506188
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:57260524-57263346 [Contig_View]  LOC100506188 [Vega]
TCGA cBioPortalLOC100506188
AceView (NCBI)LOC100506188
Genatlas (Paris)LOC100506188
SOURCE (Princeton)LOC100506188
Genetics Home Reference (NIH)LOC100506188
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100506188  -     chr6:57260524-57263346 -  6p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100506188  -     6p11.2   [Description]    (hg19-Feb_2009)
GoldenPathLOC100506188 - 6p11.2 [CytoView hg19]  LOC100506188 - 6p11.2 [CytoView hg38]
Genome Data Viewer NCBILOC100506188 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI041654 BX379795 BX389603 DA108966
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100506188
Gene ExpressionLOC100506188 [ NCBI-GEO ]   LOC100506188 [ EBI - ARRAY_EXPRESS ]   LOC100506188 [ SEEK ]   LOC100506188 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100506188 [ Firebrowse - Broad ]
GenevisibleExpression of LOC100506188 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100506188
GTEX Portal (Tissue expression)LOC100506188
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100506188
Protein Interaction databases
Ontologies - Pathways
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:01:44 CEST 2021

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