Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100506271 (uncharacterized LOC100506271)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100506271
Atlas_Id 66797
Location 22q13.1  [Link to chromosome band 22q13]
Location_base_pair Starts at 37352191 and ends at 37354839 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100506271  100506271  uncharacterized LOC100506271
Aliases
GeneCards (Weizmann)LOC100506271
Ensembl hg19 (Hinxton)ENSG00000237862 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237862 [Gene_View]  chr22:37352191-37354839 [Contig_View]  LOC100506271 [Vega]
ICGC DataPortalENSG00000237862
TCGA cBioPortalLOC100506271
AceView (NCBI)LOC100506271
Genatlas (Paris)LOC100506271
WikiGenes100506271
SOURCE (Princeton)LOC100506271
Genetics Home Reference (NIH)LOC100506271
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100506271  -     chr22:37352191-37354839 -  22q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100506271  -     22q13.1   [Description]    (hg19-Feb_2009)
EnsemblLOC100506271 - 22q13.1 [CytoView hg19]  LOC100506271 - 22q13.1 [CytoView hg38]
Mapping of homologs : NCBILOC100506271 [Mapview hg19]  LOC100506271 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK097787 BC043218
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100506271
Cluster EST : UnigeneHs.220558 [ NCBI ]
CGAP (NCI)Hs.220558
Alternative Splicing GalleryENSG00000237862
Gene ExpressionLOC100506271 [ NCBI-GEO ]   LOC100506271 [ EBI - ARRAY_EXPRESS ]   LOC100506271 [ SEEK ]   LOC100506271 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100506271 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506271
GTEX Portal (Tissue expression)LOC100506271
Human Protein AtlasENSG00000237862-LOC100506271 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100506271
DMDM Disease mutations100506271
Blocks (Seattle)LOC100506271
Human Protein Atlas [tissue]ENSG00000237862-LOC100506271 [tissue]
Protein Interaction databases
FunCoupENSG00000237862
BioGRIDLOC100506271
STRING (EMBL)LOC100506271
ZODIACLOC100506271
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100506271
BioCentury BCIQLOC100506271
ClinGenLOC100506271
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506271
Clinical trialLOC100506271
Miscellaneous
canSAR (ICR)LOC100506271 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100506271
EVEXLOC100506271
GoPubMedLOC100506271
iHOPLOC100506271
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:48:38 CET 2017

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