Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100506470 (uncharacterized LOC100506470)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100506470
Atlas_Id 66820
Location 20q13.33  [Link to chromosome band 20q13]
Location_base_pair Starts at 59654120 and ends at 59655235 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100506470  100506470  uncharacterized LOC100506470
Aliases
GeneCards (Weizmann)LOC100506470
Ensembl hg19 (Hinxton)ENSG00000229606 [Gene_View]  chr20:59654120-59655235 [Contig_View]  LOC100506470 [Vega]
Ensembl hg38 (Hinxton)ENSG00000229606 [Gene_View]  chr20:59654120-59655235 [Contig_View]  LOC100506470 [Vega]
ICGC DataPortalENSG00000229606
TCGA cBioPortalLOC100506470
AceView (NCBI)LOC100506470
Genatlas (Paris)LOC100506470
WikiGenes100506470
SOURCE (Princeton)LOC100506470
Genetics Home Reference (NIH)LOC100506470
Genomic and cartography
GoldenPath hg19 (UCSC)LOC100506470  -     chr20:59654120-59655235 +  20q13.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC100506470  -     20q13.33   [Description]    (hg38-Dec_2013)
EnsemblLOC100506470 - 20q13.33 [CytoView hg19]  LOC100506470 - 20q13.33 [CytoView hg38]
Mapping of homologs : NCBILOC100506470 [Mapview hg19]  LOC100506470 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX106486 HG511507 HY047124
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000020 NC_018931 NT_011362 NW_004929418
Consensus coding sequences : CCDS (NCBI)LOC100506470
Cluster EST : UnigeneHs.125674 [ NCBI ]
CGAP (NCI)Hs.125674
Alternative Splicing GalleryENSG00000229606
Gene ExpressionLOC100506470 [ NCBI-GEO ]   LOC100506470 [ EBI - ARRAY_EXPRESS ]   LOC100506470 [ SEEK ]   LOC100506470 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100506470 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506470
GTEX Portal (Tissue expression)LOC100506470
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100506470
DMDM Disease mutations100506470
Blocks (Seattle)LOC100506470
Human Protein AtlasENSG00000229606
Protein Interaction databases
FunCoupENSG00000229606
BioGRIDLOC100506470
STRING (EMBL)LOC100506470
ZODIACLOC100506470
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100506470
BioCentury BCIQLOC100506470
ClinGenLOC100506470
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506470
Clinical trialLOC100506470
Miscellaneous
canSAR (ICR)LOC100506470 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100506470
EVEXLOC100506470
GoPubMedLOC100506470
iHOPLOC100506470
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:17:10 CET 2017

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