Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC100506548 (uncharacterized LOC100506548)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100506548
Atlas_Id 66830
Location 5p13.1  [Link to chromosome band 5p13]
Location_base_pair Starts at 40825263 and ends at 40829142 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100506548  100506548  uncharacterized LOC100506548
Aliases
GeneCards (Weizmann)LOC100506548
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:40825263-40829142 [Contig_View]  LOC100506548 [Vega]
TCGA cBioPortalLOC100506548
AceView (NCBI)LOC100506548
Genatlas (Paris)LOC100506548
WikiGenes100506548
SOURCE (Princeton)LOC100506548
Genetics Home Reference (NIH)LOC100506548
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100506548  -     chr5:40825263-40829142 -  5p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100506548  -     5p13.1   [Description]    (hg19-Feb_2009)
EnsemblLOC100506548 - 5p13.1 [CytoView hg19]  LOC100506548 - 5p13.1 [CytoView hg38]
Mapping of homologs : NCBILOC100506548 [Mapview hg19]  LOC100506548 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL137450
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100506548
Cluster EST : UnigeneHs.80545 [ NCBI ]
CGAP (NCI)Hs.80545
Gene ExpressionLOC100506548 [ NCBI-GEO ]   LOC100506548 [ EBI - ARRAY_EXPRESS ]   LOC100506548 [ SEEK ]   LOC100506548 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100506548 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506548
GTEX Portal (Tissue expression)LOC100506548
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100506548
DMDM Disease mutations100506548
Blocks (Seattle)LOC100506548
Protein Interaction databases
BioGRIDLOC100506548
STRING (EMBL)LOC100506548
ZODIACLOC100506548
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100506548
BioCentury BCIQLOC100506548
ClinGenLOC100506548
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506548
Clinical trialLOC100506548
Miscellaneous
canSAR (ICR)LOC100506548 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100506548
EVEXLOC100506548
GoPubMedLOC100506548
iHOPLOC100506548
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 16:02:44 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.