Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC100506606 (uncharacterized LOC100506606)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100506606
Atlas_Id 66835
Location 12p11.22  [Link to chromosome band 12p11]
Location_base_pair Starts at 29280416 and ends at 29317848 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100506606  100506606  uncharacterized LOC100506606
Aliases
GeneCards (Weizmann)LOC100506606
Ensembl hg19 (Hinxton)ENSG00000257176 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000257176 [Gene_View]  chr12:29280416-29317848 [Contig_View]  LOC100506606 [Vega]
ICGC DataPortalENSG00000257176
TCGA cBioPortalLOC100506606
AceView (NCBI)LOC100506606
Genatlas (Paris)LOC100506606
WikiGenes100506606
SOURCE (Princeton)LOC100506606
Genetics Home Reference (NIH)LOC100506606
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100506606  -     chr12:29280416-29317848 -  12p11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100506606  -     12p11.22   [Description]    (hg19-Feb_2009)
EnsemblLOC100506606 - 12p11.22 [CytoView hg19]  LOC100506606 - 12p11.22 [CytoView hg38]
Mapping of homologs : NCBILOC100506606 [Mapview hg19]  LOC100506606 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK090590 BX115507
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100506606
Cluster EST : UnigeneHs.298851 [ NCBI ]
CGAP (NCI)Hs.298851
Alternative Splicing GalleryENSG00000257176
Gene ExpressionLOC100506606 [ NCBI-GEO ]   LOC100506606 [ EBI - ARRAY_EXPRESS ]   LOC100506606 [ SEEK ]   LOC100506606 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100506606 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506606
GTEX Portal (Tissue expression)LOC100506606
Human Protein AtlasENSG00000257176-LOC100506606 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100506606
DMDM Disease mutations100506606
Blocks (Seattle)LOC100506606
Human Protein Atlas [tissue]ENSG00000257176-LOC100506606 [tissue]
Protein Interaction databases
FunCoupENSG00000257176
BioGRIDLOC100506606
STRING (EMBL)LOC100506606
ZODIACLOC100506606
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100506606
BioCentury BCIQLOC100506606
ClinGenLOC100506606
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506606
Clinical trialLOC100506606
Miscellaneous
canSAR (ICR)LOC100506606 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100506606
EVEXLOC100506606
GoPubMedLOC100506606
iHOPLOC100506606
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:48:48 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.