Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100506634 (hepatocellular carcinoma-associated antigen HCA25a)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100506634
Atlas_Id 51846
Location 19q13.43  [Link to chromosome band 19q13]
Location_base_pair Starts at 58404251 and ends at 58407296 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100506634  100506634  hepatocellular carcinoma-associated antigen HCA25a
Aliases
GeneCards (Weizmann)LOC100506634
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:58404251-58407296 [Contig_View]  LOC100506634 [Vega]
TCGA cBioPortalLOC100506634
AceView (NCBI)LOC100506634
Genatlas (Paris)LOC100506634
WikiGenes100506634
SOURCE (Princeton)LOC100506634
Genetics Home Reference (NIH)LOC100506634
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100506634  -     chr19:58404251-58407296 -  19q13.43   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100506634  -     19q13.43   [Description]    (hg19-Feb_2009)
EnsemblLOC100506634 - 19q13.43 [CytoView hg19]  LOC100506634 - 19q13.43 [CytoView hg38]
Mapping of homologs : NCBILOC100506634 [Mapview hg19]  LOC100506634 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF469043 BC013784
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100506634
Cluster EST : UnigeneHs.664152 [ NCBI ]
CGAP (NCI)Hs.664152
Gene ExpressionLOC100506634 [ NCBI-GEO ]   LOC100506634 [ EBI - ARRAY_EXPRESS ]   LOC100506634 [ SEEK ]   LOC100506634 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100506634 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506634
GTEX Portal (Tissue expression)LOC100506634
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100506634
DMDM Disease mutations100506634
Blocks (Seattle)LOC100506634
Protein Interaction databases
BioGRIDLOC100506634
STRING (EMBL)LOC100506634
ZODIACLOC100506634
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100506634
BioCentury BCIQLOC100506634
ClinGenLOC100506634
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506634
Clinical trialLOC100506634
Miscellaneous
canSAR (ICR)LOC100506634 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100506634
EVEXLOC100506634
GoPubMedLOC100506634
iHOPLOC100506634
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 12:23:05 CEST 2017

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