Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100506682 (uncharacterized LOC100506682)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100506682
Atlas_Id 66840
Location 7q31.33  [Link to chromosome band 7q31]
Location_base_pair Starts at 127476883 and ends at 127485804 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100506682  100506682  uncharacterized LOC100506682
Aliases
GeneCards (Weizmann)LOC100506682
Ensembl hg19 (Hinxton)ENSG00000226770 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226770 [Gene_View]  chr7:127476883-127485804 [Contig_View]  LOC100506682 [Vega]
ICGC DataPortalENSG00000226770
TCGA cBioPortalLOC100506682
AceView (NCBI)LOC100506682
Genatlas (Paris)LOC100506682
WikiGenes100506682
SOURCE (Princeton)LOC100506682
Genetics Home Reference (NIH)LOC100506682
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100506682  -     chr7:127476883-127485804 +  7q31.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100506682  -     7q31.33   [Description]    (hg19-Feb_2009)
EnsemblLOC100506682 - 7q31.33 [CytoView hg19]  LOC100506682 - 7q31.33 [CytoView hg38]
Mapping of homologs : NCBILOC100506682 [Mapview hg19]  LOC100506682 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI198877 BM715667 BX095908
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100506682
Cluster EST : UnigeneHs.148450 [ NCBI ]
CGAP (NCI)Hs.148450
Alternative Splicing GalleryENSG00000226770
Gene ExpressionLOC100506682 [ NCBI-GEO ]   LOC100506682 [ EBI - ARRAY_EXPRESS ]   LOC100506682 [ SEEK ]   LOC100506682 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100506682 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506682
GTEX Portal (Tissue expression)LOC100506682
Human Protein AtlasENSG00000226770-LOC100506682 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100506682
DMDM Disease mutations100506682
Blocks (Seattle)LOC100506682
Human Protein Atlas [tissue]ENSG00000226770-LOC100506682 [tissue]
Protein Interaction databases
FunCoupENSG00000226770
BioGRIDLOC100506682
STRING (EMBL)LOC100506682
ZODIACLOC100506682
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100506682
BioCentury BCIQLOC100506682
ClinGenLOC100506682
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506682
Clinical trialLOC100506682
Miscellaneous
canSAR (ICR)LOC100506682 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100506682
EVEXLOC100506682
GoPubMedLOC100506682
iHOPLOC100506682
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:48:49 CET 2017

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