Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100506790 (uncharacterized LOC100506790)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100506790
Atlas_Id 66849
Location Xq26.3  [Link to chromosome band Xq26]
Location_base_pair Starts at 135396429 and ends at 135397747 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100506790  100506790  uncharacterized LOC100506790
Aliases
GeneCards (Weizmann)LOC100506790
Ensembl hg19 (Hinxton)ENSG00000229015 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229015 [Gene_View]  chrX:135396429-135397747 [Contig_View]  LOC100506790 [Vega]
ICGC DataPortalENSG00000229015
TCGA cBioPortalLOC100506790
AceView (NCBI)LOC100506790
Genatlas (Paris)LOC100506790
WikiGenes100506790
SOURCE (Princeton)LOC100506790
Genetics Home Reference (NIH)LOC100506790
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100506790  -     chrX:135396429-135397747 +  Xq26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100506790  -     Xq26.3   [Description]    (hg19-Feb_2009)
EnsemblLOC100506790 - Xq26.3 [CytoView hg19]  LOC100506790 - Xq26.3 [CytoView hg38]
Mapping of homologs : NCBILOC100506790 [Mapview hg19]  LOC100506790 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX096809
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100506790
Cluster EST : UnigeneHs.161358 [ NCBI ]
CGAP (NCI)Hs.161358
Alternative Splicing GalleryENSG00000229015
Gene ExpressionLOC100506790 [ NCBI-GEO ]   LOC100506790 [ EBI - ARRAY_EXPRESS ]   LOC100506790 [ SEEK ]   LOC100506790 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100506790 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506790
GTEX Portal (Tissue expression)LOC100506790
Human Protein AtlasENSG00000229015-LOC100506790 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100506790
DMDM Disease mutations100506790
Blocks (Seattle)LOC100506790
Human Protein Atlas [tissue]ENSG00000229015-LOC100506790 [tissue]
Protein Interaction databases
FunCoupENSG00000229015
BioGRIDLOC100506790
STRING (EMBL)LOC100506790
ZODIACLOC100506790
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100506790
BioCentury BCIQLOC100506790
ClinGenLOC100506790
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506790
Clinical trialLOC100506790
Miscellaneous
canSAR (ICR)LOC100506790 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100506790
EVEXLOC100506790
GoPubMedLOC100506790
iHOPLOC100506790
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:48:51 CET 2017

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