Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC100507053 (uncharacterized LOC100507053)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100507053
Atlas_Id 66865
Location 4q23  [Link to chromosome band 4q23]
Location_base_pair Starts at 99088857 and ends at 99301356 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100507053  100507053  uncharacterized LOC100507053
Aliases
GeneCards (Weizmann)LOC100507053
Ensembl hg19 (Hinxton)ENSG00000246090 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000246090 [Gene_View]  chr4:99088857-99301356 [Contig_View]  LOC100507053 [Vega]
ICGC DataPortalENSG00000246090
TCGA cBioPortalLOC100507053
AceView (NCBI)LOC100507053
Genatlas (Paris)LOC100507053
WikiGenes100507053
SOURCE (Princeton)LOC100507053
Genetics Home Reference (NIH)LOC100507053
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100507053  -     chr4:99088857-99301356 +  4q23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100507053  -     4q23   [Description]    (hg19-Feb_2009)
EnsemblLOC100507053 - 4q23 [CytoView hg19]  LOC100507053 - 4q23 [CytoView hg38]
Mapping of homologs : NCBILOC100507053 [Mapview hg19]  LOC100507053 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC038532 BX647987
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100507053
Cluster EST : UnigeneHs.662601 [ NCBI ]
CGAP (NCI)Hs.662601
Alternative Splicing GalleryENSG00000246090
Gene ExpressionLOC100507053 [ NCBI-GEO ]   LOC100507053 [ EBI - ARRAY_EXPRESS ]   LOC100507053 [ SEEK ]   LOC100507053 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100507053 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507053
GTEX Portal (Tissue expression)LOC100507053
Human Protein AtlasENSG00000246090-LOC100507053 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100507053
DMDM Disease mutations100507053
Blocks (Seattle)LOC100507053
Human Protein Atlas [tissue]ENSG00000246090-LOC100507053 [tissue]
Protein Interaction databases
FunCoupENSG00000246090
BioGRIDLOC100507053
STRING (EMBL)LOC100507053
ZODIACLOC100507053
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100507053
BioCentury BCIQLOC100507053
ClinGenLOC100507053
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507053
Clinical trialLOC100507053
Miscellaneous
canSAR (ICR)LOC100507053 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100507053
EVEXLOC100507053
GoPubMedLOC100507053
iHOPLOC100507053
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:48:56 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.