Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100507291 (uncharacterized LOC100507291)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100507291
Atlas_Id 66886
Location 3q23  [Link to chromosome band 3q23]
Location_base_pair Starts at 139389803 and ends at 139444604 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100507291  100507291  uncharacterized LOC100507291
Aliases
GeneCards (Weizmann)LOC100507291
Ensembl hg19 (Hinxton)ENSG00000248932 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248932 [Gene_View]  chr3:139389803-139444604 [Contig_View]  LOC100507291 [Vega]
ICGC DataPortalENSG00000248932
TCGA cBioPortalLOC100507291
AceView (NCBI)LOC100507291
Genatlas (Paris)LOC100507291
WikiGenes100507291
SOURCE (Princeton)LOC100507291
Genetics Home Reference (NIH)LOC100507291
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100507291  -     chr3:139389803-139444604 +  3q23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100507291  -     3q23   [Description]    (hg19-Feb_2009)
EnsemblLOC100507291 - 3q23 [CytoView hg19]  LOC100507291 - 3q23 [CytoView hg38]
Mapping of homologs : NCBILOC100507291 [Mapview hg19]  LOC100507291 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX098847 DA364121 DA756291 DB034152 DB446595
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100507291
Cluster EST : UnigeneHs.699071 [ NCBI ]
CGAP (NCI)Hs.699071
Alternative Splicing GalleryENSG00000248932
Gene ExpressionLOC100507291 [ NCBI-GEO ]   LOC100507291 [ EBI - ARRAY_EXPRESS ]   LOC100507291 [ SEEK ]   LOC100507291 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100507291 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507291
GTEX Portal (Tissue expression)LOC100507291
Human Protein AtlasENSG00000248932-LOC100507291 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100507291
DMDM Disease mutations100507291
Blocks (Seattle)LOC100507291
Human Protein Atlas [tissue]ENSG00000248932-LOC100507291 [tissue]
Protein Interaction databases
FunCoupENSG00000248932
BioGRIDLOC100507291
STRING (EMBL)LOC100507291
ZODIACLOC100507291
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100507291
BioCentury BCIQLOC100507291
ClinGenLOC100507291
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507291
Clinical trialLOC100507291
Miscellaneous
canSAR (ICR)LOC100507291 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100507291
EVEXLOC100507291
GoPubMedLOC100507291
iHOPLOC100507291
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:02:13 CET 2017

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