Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC100507406 (uncharacterized LOC100507406)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100507406
Atlas_Id 66899
Location 6q23.3  [Link to chromosome band 6q23]
Location_base_pair Starts at 137730171 and ends at 137739037 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100507406  100507406  uncharacterized LOC100507406
Aliases
GeneCards (Weizmann)LOC100507406
Ensembl hg19 (Hinxton)ENSG00000234956 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234956 [Gene_View]  ENSG00000234956 [Sequence]  chr6:137730171-137739037 [Contig_View]  LOC100507406 [Vega]
ICGC DataPortalENSG00000234956
TCGA cBioPortalLOC100507406
AceView (NCBI)LOC100507406
Genatlas (Paris)LOC100507406
WikiGenes100507406
SOURCE (Princeton)LOC100507406
Genetics Home Reference (NIH)LOC100507406
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100507406  -     chr6:137730171-137739037 -  6q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100507406  -     6q23.3   [Description]    (hg19-Feb_2009)
EnsemblLOC100507406 - 6q23.3 [CytoView hg19]  LOC100507406 - 6q23.3 [CytoView hg38]
Mapping of homologs : NCBILOC100507406 [Mapview hg19]  LOC100507406 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BF970945 BQ011120 N41668
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100507406
Cluster EST : UnigeneHs.556703 [ NCBI ]
CGAP (NCI)Hs.556703
Alternative Splicing GalleryENSG00000234956
Gene ExpressionLOC100507406 [ NCBI-GEO ]   LOC100507406 [ EBI - ARRAY_EXPRESS ]   LOC100507406 [ SEEK ]   LOC100507406 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100507406 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507406
GTEX Portal (Tissue expression)LOC100507406
Human Protein AtlasENSG00000234956-LOC100507406 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100507406
DMDM Disease mutations100507406
Blocks (Seattle)LOC100507406
Human Protein Atlas [tissue]ENSG00000234956-LOC100507406 [tissue]
Protein Interaction databases
FunCoupENSG00000234956
BioGRIDLOC100507406
STRING (EMBL)LOC100507406
ZODIACLOC100507406
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100507406
BioCentury BCIQLOC100507406
ClinGenLOC100507406
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507406
Clinical trialLOC100507406
Miscellaneous
canSAR (ICR)LOC100507406 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100507406
EVEXLOC100507406
GoPubMedLOC100507406
iHOPLOC100507406
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:01:11 CEST 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.